sample tissue condition fpkm SRR1569491 embryo normal 60.5942 SRR594771 endothelium normal 51.9364 SRR1569495 embryo normal 47.4929 SRR658547 6 somite Gata5/6 morphant 44.8609 ERR023144 brain normal 44.7258 SRR1299124 caudal fin Zero day time after treatment 43.9754 SRR535978 larvae normal 42.0363 SRR658535 bud Gata5 morphant 40.605 ERR023143 swim bladder normal 39.6426 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 38.3925 SRR516125 skin male and 3.5 year 37.6383 SRR527840 24hpf normal 37.5399 SRR516123 skin male and 3.5 year 36.344 SRR797911 embryo prdm1-/- 36.2324 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 36.1226 SRR1299127 caudal fin Two days time after treatment 35.8807 SRR658533 bud normal 35.5344 SRR527836 24hpf normal 35.4625 SRR658543 6 somite Gata5 morphan 35.2613 SRR516121 skin male and 3.5 year 35.0119 SRR1299128 caudal fin Three days time after treatment 34.715 ERR023146 head kidney normal 34.7103 SRR658545 6 somite Gata6 morphant 34.6025 SRR658539 bud Gata5/6 morphant 34.5246 SRR516131 skin male and 5 month 34.4814 SRR1205154 5dpf transgenic sqET20 34.4332 SRR516133 skin male and 5 month 34.4198 SRR1291417 5 dpi injected marinum 34.3027 SRR658541 6 somite normal 34.0431 SRR797917 embryo pbx2/4-MO and prdm1-/- 34.0139 SRR535986 larvae nhsl1b mut 33.7643 SRR797908 embryo normal 33.6687 SRR797914 embryo pbx2/4-MO 33.4583 SRR527844 24hpf normal 32.6844 SRR1291414 5 dpi normal 31.9768 SRR630464 5 dpf injected epidermidis 31.5909 SRR516129 skin male and 5 month 31.4253 SRR516128 skin male and 5 month 31.2417 SRR630463 5 dpf normal 31.2075 SRR1299126 caudal fin One day time after treatment 30.9732 SRR516126 skin male and 5 month 30.636 SRR516124 skin male and 3.5 year 30.1683 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 29.753 SRR1299129 caudal fin Seven days time after treatment 28.8087 SRR516122 skin male and 3.5 year 28.5613 SRR1299125 caudal fin Half day time after treatment 28.5339 ERR023145 heart normal 28.4958 SRR1523211 embryo control morpholino 28.3175 SRR594769 blood normal 27.0818 SRR1562528 eye normal 26.8526 SRR516127 skin male and 5 month 26.3605 SRR700537 heart Gata4 morpholino 26.1753 SRR700534 heart control morpholino 25.1502 SRR516132 skin male and 5 month 24.8645 SRR516134 skin male and 5 month 24.8463 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 24.4918 SRR1562532 spleen normal 24.355 SRR1708345 embryo SIBAS 24.2906 SRR1565805 brain normal 24.1455 SRR1205160 5dpf transgenic sqET20 and GFP+ 23.741 SRR1523214 embryo glut12 morpholino 23.6235 SRR1565807 brain normal 23.479 SRR1167753 embryo bacterial infection 23.393 SRR1565813 brain normal 23.2674 SRR776507 embryo normal 22.9754 SRR065196 3 dpf normal 22.9519 SRR1534349 larvae DMSO vehicle 22.6731 SRR1708343 embryo MUTAS 22.5054 SRR1167757 embryo mpeg1 morpholino and bacterial infection 22.37 SRR1039571 gastrointestinal diet 0.1 NPM 22.3677 SRR1035981 13 hpf rx3+/+ or rx3+/- 22.0642 SRR749514 24 hpf normal 22.061999999999998 SRR1167752 embryo normal 21.8952 SRR1534350 larvae 5 ug/l BDE47 treatment 21.7692 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 21.7563 SRR658537 bud Gata6 morphant 21.6807 SRR1565817 brain normal 21.5873 ERR594417 retina normal 21.4175 SRR776510 embryo Salmonella infected and miR-146 knockdown 21.0364 ERR594418 retina transgenic flk1 and develop tumors 21.0281 SRR1565815 brain normal 20.8943 SRR1104058 heart normal 20.7589 SRR527833 5 dpf normal 20.5332 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 20.4736 SRR1035978 13 hpf rx3-/- 20.4529 SRR1004788 larvae impdh1b morpholino 20.0985 SRR1565819 brain normal 20.0442 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 20.0227 SRR749515 24 hpf eif3ha morphant 19.8507 SRR1565809 brain normal 19.8454 SRR1562529 intestine and pancreas normal 19.7047 SRR1647680 head kidney SVCV treatment 19.7031 SRR1342216 embryo norml 19.6694 SRR1565811 brain normal 19.4879 SRR516135 skin male and 5 month 19.3194 SRR1035239 liver transgenic mCherry control 19.2855 SRR516130 skin male and 5 month 19.2379 SRR1647682 spleen normal 19.2186 SRR941749 anterior pectoral fin normal 19.2097 SRR886456 256 cell 4-thio-UTP metabolic labeling 19.1668 SRR1342218 embryo marco morpholino 19.0949 SRR776508 embryo miR-146 knockdown 19.081 SRR1647683 spleen SVCV treatment 18.941 ERR594416 retina transgenic flk1 18.9158 SRR1562530 liver normal 18.8376 SRR942764 embryo myd88-/- 18.3828 SRR527834 head normal 18.3076 SRR1188152 embryo Insulin 0.5 hpi 18.1143 SRR942769 embryo myd88+/+ 17.9362 SRR1104059 heart kctd10 mut 17.5672 SRR1188160 embryo Insulin 4 hpi 17.4416 SRR519717 2 dpf FETOH treatment 17.2267 SRR886455 128 cell 4-thio-UTP metabolic labeling 17.1806 SRR1004786 larvae control morpholino 17.1047 SRR519732 7 dpf FETOH treatment 17.0472 SRR1708346 embryo SIBPS 16.8795 SRR519752 7 dpf VD3 treatment 16.8647 SRR519727 6 dpf FETOH treatment 16.8094 SRR519737 2 dpf VD3 treatment 16.7689 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 16.7309 SRR535890 larvae normal 16.6782 SRR1342217 embryo infection with Mycobacterium marinum 16.5617 SRR1188148 embryo Control PBS 0.5 hpi 16.4921 SRR1004785 larvae normal 16.3408 SRR633550 larvae exposed to hypoxia stress 16.3248 SRR610741 3 dpf express Ras 16.3059 SRR891495 heart normal 16.2753 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 16.241 SRR519747 6 dpf VD3 treatment 16.2042 SRR1534351 larvae 500 ug/l BDE47 treatment 16.1333 SRR1035984 13 hpf normal 16.0916 SRR1647679 head kidney normal 15.9853 SRR831692 embryo normal 15.9577 SRR1167762 embryo ptpn6 morpholino 15.9524 SRR1167763 embryo ptpn6 morpholino and bacterial infection 15.6858 SRR038627 embryo control morpholino 15.6412 SRR633516 larvae normal 15.639000000000001 SRR1647684 spleen SVCV treatment 15.5534 SRR726540 5 dpf normal 15.5214 SRR1167756 embryo mpeg1 morpholino 15.302999999999999 SRR514028 retina control morpholino 15.1897 SRR1035237 liver transgenic UHRF1 15.0524 SRR535943 larvae vangl mut 15.0342 SRR038625 embryo traf6 morpholino 14.9369 SRR1562531 muscle normal 14.7611 SRR776509 embryo Salmonella infected 14.5177 SRR535849 larvae normal 14.3394 SRR038624 embryo traf6 morpholino and bacterial infection 14.2966 SRR514030 retina id2a morpholino 14.0077 SRR065197 3 dpf U1C knockout 13.8675 SRR592700 pineal gland normal 13.8339 SRR038626 embryo control morpholino and bacterial infection 13.819 SRR610740 3 dpf normal 13.7017 SRR592698 pineal gland normal 13.6923 SRR535850 larvae hoxb1b mut 13.6322 SRR1039573 gastrointestinal diet 0.75 NPM 13.4965 SRR535913 larvae krox mut 13.4507 SRR535851 larvae normal 13.2607 SRR610742 3 dpf express NICD 13.1726 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 13.0581 SRR592703 pineal gland normal 12.9545 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 12.7968 SRR535848 larvae hoxb1b mut 12.7879 SRR886457 512 cell 4-thio-UTP metabolic labeling 12.7687 SRR519722 4 dpf FETOH treatment 12.7206 SRR1188156 embryo Control PBS 4 hpi 12.4778 SRR1708344 embryo MUTPS 12.4541 SRR891512 blood normal 12.4214 SRR535852 larvae hoxb1b mut 12.3742 SRR1028004 head normal 12.2504 SRR941753 posterior pectoral fin normal 12.2094 SRR1048059 pineal gland light 12.1027 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 12.0722 SRR535926 larvae normal 12.029000000000002 SRR891511 brain normal 12.026 SRR1048061 pineal gland dark 12.0081 SRR527832 16-36 hpf normal 11.8132 SRR1028002 head normal 11.8101 SRR726542 5 dpf infection with control 11.505999999999998 SRR592699 pineal gland normal 11.5021 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 11.4876 SRR535847 larvae normal 11.4629 SRR633544 larvae exposed to cold stress 11.3629 SRR519742 4 dpf VD3 treatment 11.2948 SRR726541 5 dpf infection with Mycobacterium marinum 11.0284 SRR1647681 head kidney SVCV treatment 10.677 SRR592701 pineal gland normal 10.3715 SRR592702 pineal gland normal 9.946639999999999 SRR1028003 head normal 9.664489999999999 SRR1005529 embryo control morpholino 9.103439999999999 SRR801554 embryo control morpholino 9.08935 SRR1004789 larvae impdh2 morpholino 8.54544 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 8.14138 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 7.8324 SRR801556 embryo RPS19 and p53 morpholino 7.77751 SRR1004787 larvae impdh1a morpholino 7.772130000000001 SRR891510 muscle normal 6.673839999999999 SRR1562533 testis normal 6.16779 SRR1005530 embryo RPL11 morpholino 6.0793 SRR801555 embryo RPS19 morpholino 5.20118 SRR891504 liver normal 4.16338 SRR800045 muscle normal 1.5726799999999999 SRR800046 sphere stage 5azaCyD treatment 1.0516299999999998 SRR1648856 brain normal 0.0460824 SRR957181 heart normal 0.0177666 SRR372793 shield normal 0.011711200000000001 SRR372791 dome normal 0.0094924