sample tissue condition fpkm SRR1299126 caudal fin One day time after treatment 143.32 SRR630464 5 dpf injected epidermidis 116.66799999999999 SRR1205160 5dpf transgenic sqET20 and GFP+ 116.027 SRR630463 5 dpf normal 110.479 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 109.539 ERR023144 brain normal 103.572 SRR1205154 5dpf transgenic sqET20 101.728 SRR1291417 5 dpi injected marinum 94.4784 SRR1299125 caudal fin Half day time after treatment 92.0849 SRR1299127 caudal fin Two days time after treatment 87.2736 SRR776507 embryo normal 87.2157 SRR1299124 caudal fin Zero day time after treatment 86.4619 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 82.8809 SRR1299129 caudal fin Seven days time after treatment 82.6897 SRR1291414 5 dpi normal 81.3953 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 79.4781 SRR941749 anterior pectoral fin normal 77.1785 SRR941753 posterior pectoral fin normal 76.0579 SRR1523211 embryo control morpholino 74.7423 SRR535978 larvae normal 73.5588 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 73.3929 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 72.4599 SRR1299128 caudal fin Three days time after treatment 72.1015 SRR776508 embryo miR-146 knockdown 71.1418 SRR1648856 brain normal 68.8882 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 68.5643 SRR942769 embryo myd88+/+ 67.9834 SRR1523214 embryo glut12 morpholino 66.8224 SRR535986 larvae nhsl1b mut 65.9155 ERR594417 retina normal 64.6791 SRR514028 retina control morpholino 64.5116 SRR776510 embryo Salmonella infected and miR-146 knockdown 63.2767 SRR1188152 embryo Insulin 0.5 hpi 62.8148 SRR1188160 embryo Insulin 4 hpi 62.7168 SRR891511 brain normal 62.5429 SRR776509 embryo Salmonella infected 61.8691 SRR1167752 embryo normal 61.7443 SRR516125 skin male and 3.5 year 60.7146 SRR1647682 spleen normal 58.7274 SRR942764 embryo myd88-/- 58.5673 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 57.8603 SRR1167753 embryo bacterial infection 57.6454 SRR1167762 embryo ptpn6 morpholino 57.119 SRR1004786 larvae control morpholino 56.8931 SRR516124 skin male and 3.5 year 56.4437 SRR594771 endothelium normal 56.2035 SRR1167756 embryo mpeg1 morpholino 55.8076 ERR594416 retina transgenic flk1 53.9482 SRR1342218 embryo marco morpholino 53.7192 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 53.3523 SRR527836 24hpf normal 52.8825 SRR527834 head normal 52.286 SRR514030 retina id2a morpholino 51.97 SRR658533 bud normal 51.9607 SRR516123 skin male and 3.5 year 51.6099 SRR592703 pineal gland normal 49.1489 SRR1342216 embryo norml 48.3133 SRR658541 6 somite normal 47.5474 SRR658547 6 somite Gata5/6 morphant 47.1101 SRR1647683 spleen SVCV treatment 46.9699 SRR797914 embryo pbx2/4-MO 46.3828 SRR519737 2 dpf VD3 treatment 45.8471 SRR1167757 embryo mpeg1 morpholino and bacterial infection 45.3751 SRR797917 embryo pbx2/4-MO and prdm1-/- 45.3545 SRR1342217 embryo infection with Mycobacterium marinum 45.287 SRR1188148 embryo Control PBS 0.5 hpi 45.1282 SRR658545 6 somite Gata6 morphant 45.1007 SRR516134 skin male and 5 month 45.0452 SRR1647679 head kidney normal 45.0242 SRR592700 pineal gland normal 44.9481 SRR594769 blood normal 44.7453 SRR658535 bud Gata5 morphant 44.6951 SRR1647684 spleen SVCV treatment 44.2497 SRR527844 24hpf normal 44.2049 SRR065196 3 dpf normal 44.1825 SRR535913 larvae krox mut 44.1771 SRR065197 3 dpf U1C knockout 44.1496 SRR519732 7 dpf FETOH treatment 43.8872 SRR1647680 head kidney SVCV treatment 43.7505 SRR535847 larvae normal 43.657 SRR519752 7 dpf VD3 treatment 43.0844 SRR516126 skin male and 5 month 43.0524 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 43.0162 SRR519747 6 dpf VD3 treatment 42.3341 SRR527840 24hpf normal 42.2534 SRR1004785 larvae normal 42.218999999999994 SRR519717 2 dpf FETOH treatment 42.0028 SRR1048061 pineal gland dark 41.9509 SRR1167763 embryo ptpn6 morpholino and bacterial infection 41.848 SRR519727 6 dpf FETOH treatment 41.4559 SRR535849 larvae normal 41.4273 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 41.2766 SRR891495 heart normal 41.0921 SRR1562528 eye normal 41.0187 SRR516122 skin male and 3.5 year 40.6141 SRR516131 skin male and 5 month 40.3176 SRR1004788 larvae impdh1b morpholino 39.7896 SRR535890 larvae normal 39.6657 SRR516133 skin male and 5 month 39.6269 SRR700537 heart Gata4 morpholino 39.2564 SRR516129 skin male and 5 month 39.1841 SRR1562529 intestine and pancreas normal 39.1608 SRR1647681 head kidney SVCV treatment 38.423 SRR658539 bud Gata5/6 morphant 38.3425 SRR516121 skin male and 3.5 year 38.3097 ERR594418 retina transgenic flk1 and develop tumors 37.786 SRR535851 larvae normal 37.622 SRR592698 pineal gland normal 37.5245 SRR831692 embryo normal 37.5212 SRR797908 embryo normal 37.2735 SRR797911 embryo prdm1-/- 37.2578 SRR592701 pineal gland normal 37.2553 SRR516127 skin male and 5 month 37.1694 SRR592702 pineal gland normal 37.1371 SRR519722 4 dpf FETOH treatment 36.827 SRR527833 5 dpf normal 36.7548 SRR535848 larvae hoxb1b mut 36.5295 SRR658537 bud Gata6 morphant 36.501 SRR516132 skin male and 5 month 36.4594 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 36.3769 ERR023145 heart normal 36.1962 SRR1028002 head normal 36.1584 SRR658543 6 somite Gata5 morphan 35.885999999999996 SRR516130 skin male and 5 month 35.3089 SRR038624 embryo traf6 morpholino and bacterial infection 34.6622 SRR038627 embryo control morpholino 34.4288 SRR535943 larvae vangl mut 34.3549 SRR519742 4 dpf VD3 treatment 34.1477 SRR1648855 brain normal 34.0817 SRR038626 embryo control morpholino and bacterial infection 33.8558 SRR1004787 larvae impdh1a morpholino 33.4393 SRR1648854 brain normal 33.4349 SRR535852 larvae hoxb1b mut 33.2085 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 33.1206 SRR1562532 spleen normal 33.0815 SRR527832 16-36 hpf normal 33.0401 SRR535926 larvae normal 32.8868 SRR535850 larvae hoxb1b mut 32.8398 SRR749514 24 hpf normal 32.803000000000004 SRR726541 5 dpf infection with Mycobacterium marinum 32.7606 SRR592699 pineal gland normal 32.2504 ERR023146 head kidney normal 32.0779 SRR038625 embryo traf6 morpholino 32.0581 SRR700534 heart control morpholino 31.844 SRR372800 2 dpf normal 31.3643 SRR1004789 larvae impdh2 morpholino 30.8871 SRR516128 skin male and 5 month 30.6435 SRR516135 skin male and 5 month 30.5317 SRR1028004 head normal 30.3276 SRR891510 muscle normal 30.1067 SRR1028003 head normal 29.9175 SRR610742 3 dpf express NICD 29.9055 SRR610740 3 dpf normal 29.8668 SRR1048059 pineal gland light 28.92 SRR726542 5 dpf infection with control 28.7951 SRR610741 3 dpf express Ras 28.7862 SRR372798 28 hpf normal 27.921999999999997 SRR372796 bud normal 26.9096 SRR1188156 embryo Control PBS 4 hpi 26.904 SRR749515 24 hpf eif3ha morphant 26.8127 SRR372802 5 dpf normal 25.9639 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 24.7338 SRR726540 5 dpf normal 24.4908 SRR633516 larvae normal 22.7866 SRR1039573 gastrointestinal diet 0.75 NPM 22.5578 SRR1035239 liver transgenic mCherry control 21.8835 SRR1104058 heart normal 21.7843 ERR023143 swim bladder normal 21.2398 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 21.2078 SRR1534349 larvae DMSO vehicle 21.2061 SRR801556 embryo RPS19 and p53 morpholino 20.4986 SRR1562531 muscle normal 20.4186 SRR1035978 13 hpf rx3-/- 19.3262 SRR1562533 testis normal 18.326 SRR633550 larvae exposed to hypoxia stress 18.2037 SRR891512 blood normal 17.4797 SRR1104059 heart kctd10 mut 17.4769 SRR1005530 embryo RPL11 morpholino 17.3041 SRR891504 liver normal 16.9667 SRR1708343 embryo MUTAS 16.6142 SRR1035981 13 hpf rx3+/+ or rx3+/- 16.5281 SRR1569491 embryo normal 16.0781 SRR1039571 gastrointestinal diet 0.1 NPM 16.0279 SRR1021215 sphere stage Mzeomesa 15.4908 SRR1534351 larvae 500 ug/l BDE47 treatment 14.7631 SRR886457 512 cell 4-thio-UTP metabolic labeling 14.429 SRR1569495 embryo normal 13.8721 SRR1562530 liver normal 13.8054 SRR1534350 larvae 5 ug/l BDE47 treatment 13.749 SRR1708345 embryo SIBAS 13.4593 SRR1708346 embryo SIBPS 12.7486 SRR1021213 sphere stage normal 12.4878 SRR1708344 embryo MUTPS 11.8138 SRR1035237 liver transgenic UHRF1 11.6242 SRR1565809 brain normal 11.6066 SRR1565811 brain normal 11.1098 SRR633544 larvae exposed to cold stress 10.9803 SRR1005529 embryo control morpholino 10.6649 SRR801554 embryo control morpholino 10.6488 SRR372793 shield normal 9.95214 SRR957181 heart normal 9.845089999999999 SRR748491 germ ring normal 9.34753 SRR957180 heart 7 days after heart tip amputation 8.841460000000001 SRR1035984 13 hpf normal 8.72868 SRR1565817 brain normal 8.42502 SRR1565805 brain normal 8.27961 SRR1565819 brain normal 7.9111 SRR1565813 brain normal 7.522139999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 7.0354600000000005 SRR1565815 brain normal 6.54633 SRR527835 tail normal 6.48776 SRR800046 sphere stage 5azaCyD treatment 6.40775 SRR1565807 brain normal 5.77712 SRR801555 embryo RPS19 morpholino 5.6898 SRR372791 dome normal 5.63155 SRR800049 sphere stage control treatment 3.3025 SRR800043 sphere stage normal 3.25504 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.37833 SRR748488 sperm normal 1.87283 SRR748489 egg normal 1.3068799999999998 SRR800045 muscle normal 1.29649 SRR1621206 embryo normal 0.340887 SRR800037 egg normal 0.232303 SRR372787 2-4 cell normal 0.0596717 SRR748490 1 kcell normal 0.042867699999999995 SRR372789 1K cell normal 0.0162589 SRR1049814 256 cell normal 0.00969267