sample tissue condition fpkm SRR1035981 13 hpf rx3+/+ or rx3+/- 4.12291 ERR023144 brain normal 4.04386 SRR1035978 13 hpf rx3-/- 3.48694 SRR658537 bud Gata6 morphant 3.44443 SRR1562530 liver normal 3.05246 SRR1565819 brain normal 2.8942 SRR1565811 brain normal 2.82918 SRR1565805 brain normal 2.7875900000000002 SRR1035984 13 hpf normal 2.78157 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.77852 SRR1565809 brain normal 2.76156 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.75392 SRR1565815 brain normal 2.69021 SRR1565817 brain normal 2.68938 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.56493 SRR1565807 brain normal 2.43942 SRR1028004 head normal 2.43458 SRR1565813 brain normal 2.42598 SRR038624 embryo traf6 morpholino and bacterial infection 2.36355 SRR1562533 testis normal 2.33426 SRR1104058 heart normal 2.3284 ERR594418 retina transgenic flk1 and develop tumors 2.30108 SRR1005529 embryo control morpholino 2.29868 SRR801554 embryo control morpholino 2.29522 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.29319 SRR1039571 gastrointestinal diet 0.1 NPM 2.27805 SRR535978 larvae normal 2.26954 SRR1028002 head normal 2.2598700000000003 SRR1021215 sphere stage Mzeomesa 2.2155 SRR1534350 larvae 5 ug/l BDE47 treatment 2.1604 SRR1104059 heart kctd10 mut 2.15479 SRR1534351 larvae 500 ug/l BDE47 treatment 2.1379799999999998 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.1348 SRR594771 endothelium normal 2.09156 SRR1708343 embryo MUTAS 2.01511 SRR516132 skin male and 5 month 2.01289 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.00067 SRR527833 5 dpf normal 1.93625 SRR797908 embryo normal 1.92281 SRR1534349 larvae DMSO vehicle 1.89356 SRR1647683 spleen SVCV treatment 1.8325799999999999 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.8162900000000002 SRR941753 posterior pectoral fin normal 1.81298 SRR1708345 embryo SIBAS 1.81292 SRR1028003 head normal 1.80889 SRR797911 embryo prdm1-/- 1.7804799999999998 SRR516121 skin male and 3.5 year 1.7740799999999999 SRR1205154 5dpf transgenic sqET20 1.77405 SRR941749 anterior pectoral fin normal 1.7523099999999998 ERR594416 retina transgenic flk1 1.7489299999999999 SRR1188160 embryo Insulin 4 hpi 1.74052 SRR1569491 embryo normal 1.73288 SRR658533 bud normal 1.6532 SRR797914 embryo pbx2/4-MO 1.651 ERR594417 retina normal 1.6322 SRR592703 pineal gland normal 1.6001299999999998 SRR1291417 5 dpi injected marinum 1.57761 SRR1004787 larvae impdh1a morpholino 1.57666 SRR1004788 larvae impdh1b morpholino 1.56803 SRR516122 skin male and 3.5 year 1.56514 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.56223 SRR1188152 embryo Insulin 0.5 hpi 1.5613700000000001 SRR038627 embryo control morpholino 1.56129 SRR038625 embryo traf6 morpholino 1.5513700000000001 SRR1021213 sphere stage normal 1.5413299999999999 SRR700537 heart Gata4 morpholino 1.53177 SRR065196 3 dpf normal 1.46784 SRR658545 6 somite Gata6 morphant 1.45884 SRR831692 embryo normal 1.45136 SRR1523214 embryo glut12 morpholino 1.4453200000000002 SRR535943 larvae vangl mut 1.4442 SRR1291414 5 dpi normal 1.4099 SRR1299125 caudal fin Half day time after treatment 1.38983 SRR630464 5 dpf injected epidermidis 1.37537 SRR658535 bud Gata5 morphant 1.37474 SRR1562532 spleen normal 1.3464200000000002 SRR658541 6 somite normal 1.31855 SRR891511 brain normal 1.30599 SRR1342218 embryo marco morpholino 1.3046200000000001 SRR1188148 embryo Control PBS 0.5 hpi 1.2830700000000002 SRR610742 3 dpf express NICD 1.28169 SRR516128 skin male and 5 month 1.27465 SRR535926 larvae normal 1.27463 SRR516135 skin male and 5 month 1.27325 SRR1299127 caudal fin Two days time after treatment 1.26895 SRR749515 24 hpf eif3ha morphant 1.2637 SRR516126 skin male and 5 month 1.25995 SRR942769 embryo myd88+/+ 1.2567700000000002 SRR594769 blood normal 1.24936 SRR514030 retina id2a morpholino 1.24466 SRR1167752 embryo normal 1.24437 SRR1167753 embryo bacterial infection 1.189 SRR527832 16-36 hpf normal 1.17593 SRR891495 heart normal 1.14962 SRR1647679 head kidney normal 1.11932 SRR1167756 embryo mpeg1 morpholino 1.11921 SRR527840 24hpf normal 1.11365 SRR630463 5 dpf normal 1.10871 SRR1004786 larvae control morpholino 1.10015 SRR592700 pineal gland normal 1.09802 SRR658539 bud Gata5/6 morphant 1.0971899999999999 SRR800043 sphere stage normal 1.0843200000000002 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.07889 SRR1188156 embryo Control PBS 4 hpi 1.07676 SRR633550 larvae exposed to hypoxia stress 1.06739 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.0601399999999999 SRR1299129 caudal fin Seven days time after treatment 1.05293 SRR801555 embryo RPS19 morpholino 1.04911 SRR1005530 embryo RPL11 morpholino 1.04011 SRR516125 skin male and 3.5 year 1.03692 SRR1708344 embryo MUTPS 1.03293 SRR748491 germ ring normal 1.03013 SRR1647682 spleen normal 1.02165 SRR519732 7 dpf FETOH treatment 1.01675 SRR749514 24 hpf normal 1.01265 SRR726540 5 dpf normal 1.00843 SRR886455 128 cell 4-thio-UTP metabolic labeling 1.0077 SRR535850 larvae hoxb1b mut 0.998567 SRR1708346 embryo SIBPS 0.9884350000000001 SRR516134 skin male and 5 month 0.9869180000000001 SRR1035239 liver transgenic mCherry control 0.986311 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.9713440000000001 SRR516127 skin male and 5 month 0.9699 SRR592702 pineal gland normal 0.9644520000000001 SRR516129 skin male and 5 month 0.954356 SRR801556 embryo RPS19 and p53 morpholino 0.9434670000000001 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.941509 SRR516131 skin male and 5 month 0.906969 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.9047430000000001 SRR527834 head normal 0.900443 SRR535890 larvae normal 0.89556 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.8900879999999999 SRR1342216 embryo norml 0.885343 SRR519737 2 dpf VD3 treatment 0.8731 SRR658547 6 somite Gata5/6 morphant 0.868984 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.866858 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.845735 SRR516123 skin male and 3.5 year 0.830815 SRR748490 1 kcell normal 0.8269860000000001 SRR891512 blood normal 0.825943 SRR1569495 embryo normal 0.823931 SRR516133 skin male and 5 month 0.82295 SRR726542 5 dpf infection with control 0.820859 SRR1004789 larvae impdh2 morpholino 0.8169350000000001 SRR519742 4 dpf VD3 treatment 0.816283 SRR1647680 head kidney SVCV treatment 0.815803 SRR1299128 caudal fin Three days time after treatment 0.802214 SRR658543 6 somite Gata5 morphan 0.800506 SRR592699 pineal gland normal 0.7937850000000001 SRR065197 3 dpf U1C knockout 0.79183 SRR726541 5 dpf infection with Mycobacterium marinum 0.766849 SRR519722 4 dpf FETOH treatment 0.765586 SRR633516 larvae normal 0.759575 SRR800046 sphere stage 5azaCyD treatment 0.758558 SRR519747 6 dpf VD3 treatment 0.751637 SRR1562528 eye normal 0.746726 SRR1523211 embryo control morpholino 0.745657 SRR1299126 caudal fin One day time after treatment 0.733247 SRR1004785 larvae normal 0.731924 SRR1342217 embryo infection with Mycobacterium marinum 0.7306739999999999 SRR1039573 gastrointestinal diet 0.75 NPM 0.7260310000000001 SRR519752 7 dpf VD3 treatment 0.7191529999999999 SRR535847 larvae normal 0.705959 SRR038626 embryo control morpholino and bacterial infection 0.70591 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.6983689999999999 SRR1299124 caudal fin Zero day time after treatment 0.681719 SRR1647681 head kidney SVCV treatment 0.6753640000000001 SRR519727 6 dpf FETOH treatment 0.67342 SRR519717 2 dpf FETOH treatment 0.6700510000000001 SRR535986 larvae nhsl1b mut 0.668474 SRR527836 24hpf normal 0.663381 SRR516124 skin male and 3.5 year 0.6606890000000001 SRR1647684 spleen SVCV treatment 0.6561100000000001 SRR592698 pineal gland normal 0.65464 SRR535852 larvae hoxb1b mut 0.637567 SRR1167762 embryo ptpn6 morpholino 0.627249 SRR592701 pineal gland normal 0.616984 SRR776508 embryo miR-146 knockdown 0.6130909999999999 SRR514028 retina control morpholino 0.613024 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.601776 SRR535849 larvae normal 0.58781 SRR700534 heart control morpholino 0.585023 SRR535851 larvae normal 0.556571 SRR535913 larvae krox mut 0.5463140000000001 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.533455 SRR527844 24hpf normal 0.528614 SRR633544 larvae exposed to cold stress 0.521943 SRR610740 3 dpf normal 0.513649 SRR535848 larvae hoxb1b mut 0.477579 SRR1048061 pineal gland dark 0.47203599999999996 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.465562 SRR800037 egg normal 0.464656 SRR800049 sphere stage control treatment 0.45164799999999994 SRR776509 embryo Salmonella infected 0.447405 ERR023143 swim bladder normal 0.44674200000000003 SRR527835 tail normal 0.376529 SRR776507 embryo normal 0.344876 SRR748488 sperm normal 0.333908 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.304561 SRR1562531 muscle normal 0.304085 SRR891504 liver normal 0.300154 SRR610741 3 dpf express Ras 0.28098 SRR942764 embryo myd88-/- 0.253793 ERR023145 heart normal 0.222002 SRR1035237 liver transgenic UHRF1 0.14439000000000002 SRR516130 skin male and 5 month 0.12929300000000002 SRR1048059 pineal gland light 0.08676610000000001 ERR023146 head kidney normal 0.07672230000000001