sample tissue condition fpkm SRR372793 shield normal 12.5052 SRR658537 bud Gata6 morphant 11.4233 SRR658533 bud normal 11.1998 SRR658535 bud Gata5 morphant 10.9321 SRR658539 bud Gata5/6 morphant 10.6701 SRR658547 6 somite Gata5/6 morphant 10.5244 SRR658541 6 somite normal 8.89269 SRR658545 6 somite Gata6 morphant 8.40488 SRR535978 larvae normal 7.79945 SRR372791 dome normal 7.71488 SRR372796 bud normal 7.638380000000001 SRR516129 skin male and 5 month 7.25621 SRR516130 skin male and 5 month 7.184830000000001 SRR1299126 caudal fin One day time after treatment 7.09777 SRR1035978 13 hpf rx3-/- 7.003769999999999 SRR658543 6 somite Gata5 morphan 6.68355 SRR1299125 caudal fin Half day time after treatment 6.5647199999999994 SRR516133 skin male and 5 month 6.33195 SRR1569491 embryo normal 6.22455 SRR594769 blood normal 6.07675 SRR516123 skin male and 3.5 year 5.76203 SRR516121 skin male and 3.5 year 5.70175 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.58895 SRR1648856 brain normal 5.44916 SRR372800 2 dpf normal 5.25991 SRR1205154 5dpf transgenic sqET20 5.0967 SRR527840 24hpf normal 4.91164 SRR1299127 caudal fin Two days time after treatment 4.87173 SRR1004788 larvae impdh1b morpholino 4.77882 SRR1035984 13 hpf normal 4.72814 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.6737400000000004 SRR1004786 larvae control morpholino 4.6727 SRR1004785 larvae normal 4.57205 SRR527833 5 dpf normal 4.53465 SRR797911 embryo prdm1-/- 4.43041 SRR797908 embryo normal 4.29041 SRR527836 24hpf normal 4.2882 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4.2794300000000005 SRR1299128 caudal fin Three days time after treatment 4.22532 SRR749515 24 hpf eif3ha morphant 4.2165300000000006 SRR700537 heart Gata4 morpholino 4.20442 SRR748491 germ ring normal 4.14539 SRR1708343 embryo MUTAS 4.13546 SRR1005529 embryo control morpholino 4.114380000000001 SRR801554 embryo control morpholino 4.1082 SRR516125 skin male and 3.5 year 4.0970699999999995 SRR726542 5 dpf infection with control 4.0949800000000005 SRR797914 embryo pbx2/4-MO 4.08598 SRR1004787 larvae impdh1a morpholino 4.04571 SRR776507 embryo normal 4.04317 SRR372802 5 dpf normal 4.03458 SRR1342218 embryo marco morpholino 4.02744 SRR594771 endothelium normal 3.98622 SRR519737 2 dpf VD3 treatment 3.9706900000000003 SRR891512 blood normal 3.96058 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.90441 SRR519717 2 dpf FETOH treatment 3.89705 SRR514028 retina control morpholino 3.8071300000000003 SRR535986 larvae nhsl1b mut 3.7559 SRR1565815 brain normal 3.73275 SRR1569495 embryo normal 3.73219 SRR1565809 brain normal 3.7298 SRR519742 4 dpf VD3 treatment 3.7141699999999997 SRR516135 skin male and 5 month 3.6377 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.634 SRR1647684 spleen SVCV treatment 3.6267 SRR1647683 spleen SVCV treatment 3.60814 SRR1104058 heart normal 3.58555 SRR630463 5 dpf normal 3.5426 SRR749514 24 hpf normal 3.52244 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 3.5183699999999996 SRR1004789 larvae impdh2 morpholino 3.5057 SRR038625 embryo traf6 morpholino 3.49595 SRR1021213 sphere stage normal 3.4936800000000003 SRR516124 skin male and 3.5 year 3.45445 SRR891495 heart normal 3.44771 SRR1534349 larvae DMSO vehicle 3.44119 SRR1708345 embryo SIBAS 3.43635 SRR1534351 larvae 500 ug/l BDE47 treatment 3.4362 SRR1565813 brain normal 3.418 SRR1565811 brain normal 3.37471 SRR1167752 embryo normal 3.36726 SRR776508 embryo miR-146 knockdown 3.3645699999999996 SRR886457 512 cell 4-thio-UTP metabolic labeling 3.35664 SRR065196 3 dpf normal 3.35402 ERR023144 brain normal 3.3258699999999997 SRR1299129 caudal fin Seven days time after treatment 3.32104 SRR1104059 heart kctd10 mut 3.2757 SRR372798 28 hpf normal 3.27255 SRR516126 skin male and 5 month 3.2703900000000004 SRR1647681 head kidney SVCV treatment 3.2549099999999997 SRR1647682 spleen normal 3.2246099999999998 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.21485 SRR630464 5 dpf injected epidermidis 3.20682 SRR065197 3 dpf U1C knockout 3.19404 SRR514030 retina id2a morpholino 3.1869 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 3.18127 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.1768 SRR1021215 sphere stage Mzeomesa 3.1539599999999997 SRR726540 5 dpf normal 3.14361 SRR527844 24hpf normal 3.12682 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.07196 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.07015 SRR527834 head normal 3.04972 SRR519727 6 dpf FETOH treatment 3.04529 SRR726541 5 dpf infection with Mycobacterium marinum 3.0025 SRR1565807 brain normal 2.9939 SRR1647680 head kidney SVCV treatment 2.93348 SRR633544 larvae exposed to cold stress 2.85921 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.81395 SRR516128 skin male and 5 month 2.8016 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.7888900000000003 SRR700534 heart control morpholino 2.78725 ERR594418 retina transgenic flk1 and develop tumors 2.77995 SRR516127 skin male and 5 month 2.77755 SRR519752 7 dpf VD3 treatment 2.74293 SRR1647679 head kidney normal 2.74283 SRR633550 larvae exposed to hypoxia stress 2.71862 SRR942769 embryo myd88+/+ 2.71485 SRR1648854 brain normal 2.6846799999999997 SRR519747 6 dpf VD3 treatment 2.67033 SRR1565805 brain normal 2.6701 SRR1708344 embryo MUTPS 2.6556599999999997 SRR1708346 embryo SIBPS 2.65414 SRR633516 larvae normal 2.64971 SRR038624 embryo traf6 morpholino and bacterial infection 2.64128 SRR519722 4 dpf FETOH treatment 2.62585 SRR535926 larvae normal 2.6142 SRR1188152 embryo Insulin 0.5 hpi 2.61134 SRR941749 anterior pectoral fin normal 2.5857099999999997 SRR800046 sphere stage 5azaCyD treatment 2.5399599999999998 SRR592702 pineal gland normal 2.5318 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.51894 SRR519732 7 dpf FETOH treatment 2.49307 SRR1299124 caudal fin Zero day time after treatment 2.46565 SRR957180 heart 7 days after heart tip amputation 2.44453 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.41058 SRR1291414 5 dpi normal 2.4088 SRR1291417 5 dpi injected marinum 2.38249 SRR800045 muscle normal 2.37359 ERR023145 heart normal 2.37068 SRR1188156 embryo Control PBS 4 hpi 2.33953 SRR1562533 testis normal 2.29894 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.2954 SRR831692 embryo normal 2.2940400000000003 SRR1188160 embryo Insulin 4 hpi 2.29353 SRR1188148 embryo Control PBS 0.5 hpi 2.2430000000000003 SRR516122 skin male and 3.5 year 2.24153 SRR1534350 larvae 5 ug/l BDE47 treatment 2.22439 SRR801556 embryo RPS19 and p53 morpholino 2.2219900000000004 SRR610741 3 dpf express Ras 2.21533 SRR1565817 brain normal 2.20455 SRR592699 pineal gland normal 2.18621 SRR1562531 muscle normal 2.1709400000000003 SRR776509 embryo Salmonella infected 2.13807 SRR957181 heart normal 2.1280799999999997 SRR1167762 embryo ptpn6 morpholino 2.12365 SRR535849 larvae normal 2.1150700000000002 SRR1167756 embryo mpeg1 morpholino 2.11368 SRR1005530 embryo RPL11 morpholino 2.1009 SRR1523214 embryo glut12 morpholino 2.08855 SRR891511 brain normal 2.07304 SRR1562532 spleen normal 2.06523 SRR535943 larvae vangl mut 2.06425 SRR038627 embryo control morpholino 2.03091 SRR941753 posterior pectoral fin normal 2.02828 SRR1523211 embryo control morpholino 2.02346 SRR1342216 embryo norml 1.9893900000000002 SRR535847 larvae normal 1.92367 SRR1565819 brain normal 1.92293 SRR592698 pineal gland normal 1.9113799999999999 SRR942764 embryo myd88-/- 1.91097 SRR610742 3 dpf express NICD 1.87327 ERR594416 retina transgenic flk1 1.8431099999999998 SRR516131 skin male and 5 month 1.8293400000000002 SRR527832 16-36 hpf normal 1.8066099999999998 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.80005 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.7991599999999999 SRR592700 pineal gland normal 1.7499200000000001 ERR594417 retina normal 1.7421400000000002 SRR1048061 pineal gland dark 1.7409599999999998 SRR535913 larvae krox mut 1.7104 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.7049299999999998 SRR1648855 brain normal 1.6594400000000002 SRR038626 embryo control morpholino and bacterial infection 1.64373 SRR1562528 eye normal 1.6384299999999998 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.5949200000000001 SRR535890 larvae normal 1.5790899999999999 ERR023143 swim bladder normal 1.5730899999999999 SRR1039571 gastrointestinal diet 0.1 NPM 1.56125 SRR1562530 liver normal 1.55274 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.53473 SRR748488 sperm normal 1.50583 SRR516134 skin male and 5 month 1.4622600000000001 SRR1167753 embryo bacterial infection 1.4265700000000001 SRR535850 larvae hoxb1b mut 1.3898 SRR610740 3 dpf normal 1.34559 ERR023146 head kidney normal 1.34328 SRR800049 sphere stage control treatment 1.33769 SRR535851 larvae normal 1.21654 SRR801555 embryo RPS19 morpholino 1.1540000000000001 SRR1048059 pineal gland light 1.14009 SRR1035239 liver transgenic mCherry control 1.0527600000000001 SRR1562529 intestine and pancreas normal 0.9630569999999999 SRR1342217 embryo infection with Mycobacterium marinum 0.959195 SRR535852 larvae hoxb1b mut 0.953247 SRR1028002 head normal 0.9012379999999999 SRR1039573 gastrointestinal diet 0.75 NPM 0.87969 SRR1028003 head normal 0.857772 SRR1035237 liver transgenic UHRF1 0.800801 SRR535848 larvae hoxb1b mut 0.776311 SRR516132 skin male and 5 month 0.715661 SRR592703 pineal gland normal 0.710863 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.7102689999999999 SRR1028004 head normal 0.624787 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.59642 SRR891510 muscle normal 0.47411400000000004 SRR527835 tail normal 0.44805100000000003 SRR592701 pineal gland normal 0.38567399999999996 SRR800043 sphere stage normal 0.327063 SRR372787 2-4 cell normal 0.18946500000000002 SRR1621206 embryo normal 0.1779 SRR372789 1K cell normal 0.14013 SRR800037 egg normal 0.0845516 SRR1049814 256 cell normal 0.0408031