sample tissue condition fpkm SRR1299127 caudal fin Two days time after treatment 83.1221 SRR1299125 caudal fin Half day time after treatment 69.85600000000001 SRR1299129 caudal fin Seven days time after treatment 57.5815 SRR1299128 caudal fin Three days time after treatment 56.9358 SRR1299126 caudal fin One day time after treatment 41.0995 SRR1299124 caudal fin Zero day time after treatment 21.8162 SRR535978 larvae normal 18.7888 SRR1205160 5dpf transgenic sqET20 and GFP+ 16.0036 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.6779 SRR1708346 embryo SIBPS 12.0901 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 11.4723 SRR516131 skin male and 5 month 10.7158 SRR372800 2 dpf normal 10.649000000000001 SRR372802 5 dpf normal 9.91581 SRR516127 skin male and 5 month 9.00677 SRR372798 28 hpf normal 8.6527 SRR516123 skin male and 3.5 year 8.56428 SRR1708344 embryo MUTPS 8.43737 SRR776508 embryo miR-146 knockdown 8.031 SRR535986 larvae nhsl1b mut 7.6954899999999995 SRR516134 skin male and 5 month 7.57574 SRR1004788 larvae impdh1b morpholino 7.2618 SRR610741 3 dpf express Ras 7.17212 SRR516128 skin male and 5 month 6.81195 SRR1004786 larvae control morpholino 6.76388 SRR516121 skin male and 3.5 year 6.12068 SRR516124 skin male and 3.5 year 6.06661 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.88331 SRR516125 skin male and 3.5 year 5.83104 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 5.6010599999999995 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.58573 SRR1291414 5 dpi normal 5.49822 SRR749514 24 hpf normal 5.4179 SRR516126 skin male and 5 month 5.33486 SRR749515 24 hpf eif3ha morphant 5.24669 SRR801555 embryo RPS19 morpholino 5.20862 SRR1167756 embryo mpeg1 morpholino 4.85149 SRR527836 24hpf normal 4.730659999999999 SRR065197 3 dpf U1C knockout 4.55276 SRR1708343 embryo MUTAS 4.49489 SRR1708345 embryo SIBAS 4.48944 SRR1004785 larvae normal 4.395969999999999 SRR776507 embryo normal 4.37368 SRR726542 5 dpf infection with control 4.2459 SRR941749 anterior pectoral fin normal 4.161519999999999 SRR527844 24hpf normal 4.15935 SRR630464 5 dpf injected epidermidis 4.0866 SRR1562529 intestine and pancreas normal 4.072080000000001 SRR800046 sphere stage 5azaCyD treatment 3.91318 SRR038624 embryo traf6 morpholino and bacterial infection 3.83724 SRR1291417 5 dpi injected marinum 3.80706 SRR527840 24hpf normal 3.79414 SRR038627 embryo control morpholino 3.7186 SRR1167752 embryo normal 3.66115 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.6495900000000003 SRR1562531 muscle normal 3.54846 SRR1167762 embryo ptpn6 morpholino 3.44804 SRR801556 embryo RPS19 and p53 morpholino 3.42495 SRR1005530 embryo RPL11 morpholino 3.23598 SRR891512 blood normal 3.1825200000000002 SRR065196 3 dpf normal 3.16488 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.12505 SRR1648856 brain normal 3.06732 SRR535850 larvae hoxb1b mut 3.04847 SRR1167753 embryo bacterial infection 2.9144099999999997 SRR038625 embryo traf6 morpholino 2.9045799999999997 SRR630463 5 dpf normal 2.84917 SRR519717 2 dpf FETOH treatment 2.84865 SRR610740 3 dpf normal 2.82246 SRR941753 posterior pectoral fin normal 2.80851 SRR535848 larvae hoxb1b mut 2.78452 SRR527834 head normal 2.76725 ERR023145 heart normal 2.76337 SRR516133 skin male and 5 month 2.73726 SRR1562528 eye normal 2.7042 SRR1523211 embryo control morpholino 2.70317 SRR1342216 embryo norml 2.67572 SRR516129 skin male and 5 month 2.65624 SRR700534 heart control morpholino 2.62965 SRR610742 3 dpf express NICD 2.62434 SRR1342218 embryo marco morpholino 2.57483 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.54891 SRR1188160 embryo Insulin 4 hpi 2.50084 SRR1004787 larvae impdh1a morpholino 2.4777299999999998 SRR1534349 larvae DMSO vehicle 2.43804 SRR535943 larvae vangl mut 2.39451 SRR594771 endothelium normal 2.38141 SRR1104058 heart normal 2.35455 SRR519742 4 dpf VD3 treatment 2.35392 SRR535847 larvae normal 2.3475599999999996 SRR1562532 spleen normal 2.2968900000000003 SRR1188152 embryo Insulin 0.5 hpi 2.28421 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.25103 SRR535926 larvae normal 2.23048 SRR516122 skin male and 3.5 year 2.2115400000000003 SRR1104059 heart kctd10 mut 2.2004799999999998 SRR038626 embryo control morpholino and bacterial infection 2.1939900000000003 SRR776509 embryo Salmonella infected 2.1886 SRR527832 16-36 hpf normal 2.15443 SRR1035984 13 hpf normal 2.13718 SRR516132 skin male and 5 month 2.1257200000000003 SRR1523214 embryo glut12 morpholino 2.1173 SRR535849 larvae normal 2.01986 SRR726540 5 dpf normal 1.9967599999999999 SRR942769 embryo myd88+/+ 1.97269 SRR519737 2 dpf VD3 treatment 1.9607299999999999 SRR1188148 embryo Control PBS 0.5 hpi 1.94592 SRR535913 larvae krox mut 1.87494 SRR527833 5 dpf normal 1.83998 SRR700537 heart Gata4 morpholino 1.80939 SRR1648854 brain normal 1.70872 SRR519722 4 dpf FETOH treatment 1.6984 SRR633550 larvae exposed to hypoxia stress 1.66872 SRR800045 muscle normal 1.60648 SRR1342217 embryo infection with Mycobacterium marinum 1.60154 SRR1534351 larvae 500 ug/l BDE47 treatment 1.58599 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.57666 SRR516130 skin male and 5 month 1.57644 SRR535851 larvae normal 1.56493 SRR1039571 gastrointestinal diet 0.1 NPM 1.53805 SRR633516 larvae normal 1.48894 SRR1039573 gastrointestinal diet 0.75 NPM 1.47642 SRR1005529 embryo control morpholino 1.45305 SRR801554 embryo control morpholino 1.45087 SRR519727 6 dpf FETOH treatment 1.4459799999999998 SRR797908 embryo normal 1.43003 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.26991 SRR1028004 head normal 1.2528 SRR1647683 spleen SVCV treatment 1.1990100000000001 ERR594418 retina transgenic flk1 and develop tumors 1.17293 SRR797911 embryo prdm1-/- 1.1594799999999998 SRR1205154 5dpf transgenic sqET20 1.14009 SRR633544 larvae exposed to cold stress 1.13917 SRR831692 embryo normal 1.1157299999999999 SRR1028003 head normal 1.11305 SRR519732 7 dpf FETOH treatment 1.07023 SRR1647682 spleen normal 1.05225 SRR535852 larvae hoxb1b mut 1.03625 ERR023144 brain normal 1.0148700000000002 SRR1035237 liver transgenic UHRF1 1.01009 SRR592702 pineal gland normal 1.00758 SRR1534350 larvae 5 ug/l BDE47 treatment 0.9990319999999999 SRR535890 larvae normal 0.9746870000000001 SRR1028002 head normal 0.961714 SRR1035978 13 hpf rx3-/- 0.956408 SRR519752 7 dpf VD3 treatment 0.929357 SRR519747 6 dpf VD3 treatment 0.9032379999999999 ERR023146 head kidney normal 0.858042 SRR1569491 embryo normal 0.8565219999999999 SRR1569495 embryo normal 0.853391 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.845751 SRR516135 skin male and 5 month 0.814699 SRR726541 5 dpf infection with Mycobacterium marinum 0.807763 SRR1562533 testis normal 0.807729 SRR797914 embryo pbx2/4-MO 0.8045399999999999 SRR1562530 liver normal 0.80278 SRR592701 pineal gland normal 0.80074 SRR942764 embryo myd88-/- 0.799819 SRR1188156 embryo Control PBS 4 hpi 0.7940159999999999 ERR023143 swim bladder normal 0.790863 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.789313 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.762009 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.7499600000000001 SRR1004789 larvae impdh2 morpholino 0.718276 SRR658543 6 somite Gata5 morphan 0.7039489999999999 SRR1648855 brain normal 0.6975600000000001 SRR658545 6 somite Gata6 morphant 0.68138 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.6667029999999999 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.653803 SRR1647684 spleen SVCV treatment 0.6271939999999999 SRR1565805 brain normal 0.6231899999999999 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.617815 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.6058859999999999 SRR1565817 brain normal 0.520972 SRR1565819 brain normal 0.519714 SRR658541 6 somite normal 0.5157609999999999 SRR748488 sperm normal 0.507927 SRR1565807 brain normal 0.48470799999999997 SRR658547 6 somite Gata5/6 morphant 0.469625 SRR527835 tail normal 0.46877299999999994 SRR594769 blood normal 0.465365 SRR891495 heart normal 0.455689 SRR1035239 liver transgenic mCherry control 0.44249499999999997 ERR594416 retina transgenic flk1 0.395504 SRR1647679 head kidney normal 0.365033 SRR514028 retina control morpholino 0.353652 SRR592698 pineal gland normal 0.35226 SRR748489 egg normal 0.326946 SRR592700 pineal gland normal 0.326565 SRR592703 pineal gland normal 0.314272 SRR658535 bud Gata5 morphant 0.27225900000000003 SRR1647681 head kidney SVCV treatment 0.269485 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.25940599999999997 SRR1565809 brain normal 0.243833 SRR1565811 brain normal 0.218763 SRR1021213 sphere stage normal 0.212173 SRR1647680 head kidney SVCV treatment 0.192187 SRR1565813 brain normal 0.174199 SRR748491 germ ring normal 0.167295 SRR891510 muscle normal 0.15978 SRR891511 brain normal 0.153988 SRR1565815 brain normal 0.149321 SRR800043 sphere stage normal 0.139323 SRR1048061 pineal gland dark 0.135326 SRR372796 bud normal 0.13034600000000002 SRR658539 bud Gata5/6 morphant 0.129244 SRR658533 bud normal 0.11871099999999998 SRR592699 pineal gland normal 0.11484100000000001 SRR658537 bud Gata6 morphant 0.11143299999999999 ERR594417 retina normal 0.0687194 SRR748490 1 kcell normal 0.0610538 SRR957181 heart normal 0.04825580000000001 SRR800037 egg normal 0.0275784 SRR514030 retina id2a morpholino 0.0268106 SRR1021215 sphere stage Mzeomesa 0.0231166 SRR372791 dome normal 0.00522304 SRR372793 shield normal 6.029880000000001e-06