sample tissue condition fpkm SRR1562530 liver normal 48.5174 SRR1562529 intestine and pancreas normal 24.1745 SRR1035239 liver transgenic mCherry control 16.1925 SRR1035237 liver transgenic UHRF1 10.6748 SRR1039571 gastrointestinal diet 0.1 NPM 10.2755 SRR1039573 gastrointestinal diet 0.75 NPM 10.2592 SRR372796 bud normal 10.207 SRR527840 24hpf normal 9.11626 SRR592702 pineal gland normal 8.35941 SRR658545 6 somite Gata6 morphant 7.4294199999999995 SRR514028 retina control morpholino 7.34163 SRR658547 6 somite Gata5/6 morphant 6.90647 SRR658537 bud Gata6 morphant 6.554119999999999 SRR592698 pineal gland normal 6.19139 SRR800037 egg normal 6.15989 SRR1562533 testis normal 5.7794099999999995 SRR592700 pineal gland normal 5.43925 SRR658539 bud Gata5/6 morphant 5.32814 SRR592703 pineal gland normal 5.10567 ERR594417 retina normal 4.88638 SRR592699 pineal gland normal 4.8301300000000005 SRR748489 egg normal 4.76503 SRR1562532 spleen normal 4.69808 SRR592701 pineal gland normal 4.67435 SRR1048061 pineal gland dark 4.18727 SRR527836 24hpf normal 4.17508 SRR658533 bud normal 3.86772 SRR514030 retina id2a morpholino 3.80546 SRR658535 bud Gata5 morphant 3.6950199999999995 SRR797911 embryo prdm1-/- 3.46812 SRR1621206 embryo normal 3.4551800000000004 ERR023146 head kidney normal 3.42202 ERR594416 retina transgenic flk1 3.41834 SRR658543 6 somite Gata5 morphan 3.26249 SRR748488 sperm normal 3.22447 SRR1049814 256 cell normal 3.14931 SRR658541 6 somite normal 3.0735900000000003 SRR800049 sphere stage control treatment 3.03525 SRR1562528 eye normal 3.03159 SRR372793 shield normal 3.01065 SRR797914 embryo pbx2/4-MO 2.7396599999999998 SRR1565809 brain normal 2.73829 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.679 SRR372802 5 dpf normal 2.67312 SRR797908 embryo normal 2.64846 SRR1565811 brain normal 2.60392 SRR527844 24hpf normal 2.5619 ERR023144 brain normal 2.54708 SRR800046 sphere stage 5azaCyD treatment 2.5295 SRR372787 2-4 cell normal 2.4681599999999997 SRR1035984 13 hpf normal 2.42563 SRR1028004 head normal 2.40705 SRR1028002 head normal 2.34646 SRR372798 28 hpf normal 2.28535 SRR1565805 brain normal 2.21873 SRR1004785 larvae normal 2.1768099999999997 SRR1004786 larvae control morpholino 2.15862 SRR1028003 head normal 2.1270599999999997 SRR1565813 brain normal 2.1249 SRR801555 embryo RPS19 morpholino 2.1106599999999998 SRR535926 larvae normal 2.073 SRR1035978 13 hpf rx3-/- 1.93524 SRR1565819 brain normal 1.8821599999999998 SRR800043 sphere stage normal 1.86484 SRR1565807 brain normal 1.84981 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.8259 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.80067 ERR594418 retina transgenic flk1 and develop tumors 1.74479 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.71443 SRR516133 skin male and 5 month 1.7113099999999999 SRR749515 24 hpf eif3ha morphant 1.69307 SRR1005529 embryo control morpholino 1.67432 SRR801554 embryo control morpholino 1.6718099999999998 SRR1342216 embryo norml 1.66188 SRR527835 tail normal 1.63544 SRR535890 larvae normal 1.61217 SRR535848 larvae hoxb1b mut 1.58704 SRR1562531 muscle normal 1.57562 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.56379 SRR1004789 larvae impdh2 morpholino 1.53988 SRR527834 head normal 1.53826 SRR535847 larvae normal 1.5294299999999998 SRR1565817 brain normal 1.51501 SRR516129 skin male and 5 month 1.4913399999999999 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.45223 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.44684 SRR535850 larvae hoxb1b mut 1.4292 SRR1569491 embryo normal 1.41995 SRR942764 embryo myd88-/- 1.39536 SRR1342218 embryo marco morpholino 1.36856 SRR630463 5 dpf normal 1.3623 SRR749514 24 hpf normal 1.35805 SRR372791 dome normal 1.34219 SRR372789 1K cell normal 1.34047 SRR1569495 embryo normal 1.33073 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.29806 SRR1167752 embryo normal 1.24561 SRR1534351 larvae 500 ug/l BDE47 treatment 1.22821 SRR1048059 pineal gland light 1.2199 SRR1565815 brain normal 1.18982 SRR748490 1 kcell normal 1.1613799999999999 SRR516122 skin male and 3.5 year 1.14935 SRR516126 skin male and 5 month 1.12366 SRR372800 2 dpf normal 1.11965 SRR801556 embryo RPS19 and p53 morpholino 1.07918 SRR1004788 larvae impdh1b morpholino 1.06487 SRR1523211 embryo control morpholino 1.05473 SRR942769 embryo myd88+/+ 1.0490000000000002 SRR535851 larvae normal 1.03474 SRR630464 5 dpf injected epidermidis 1.00632 SRR633550 larvae exposed to hypoxia stress 0.9953209999999999 SRR610742 3 dpf express NICD 0.9896450000000001 SRR535943 larvae vangl mut 0.9856090000000001 SRR1534350 larvae 5 ug/l BDE47 treatment 0.9792489999999999 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.9502809999999999 SRR1299129 caudal fin Seven days time after treatment 0.9399200000000001 SRR633516 larvae normal 0.9170309999999999 SRR1299125 caudal fin Half day time after treatment 0.9146340000000001 SRR1648854 brain normal 0.9131520000000001 SRR594769 blood normal 0.9120360000000001 SRR516135 skin male and 5 month 0.901832 SRR535849 larvae normal 0.8995770000000001 SRR1004787 larvae impdh1a morpholino 0.8822049999999999 SRR516123 skin male and 3.5 year 0.876534 SRR516131 skin male and 5 month 0.8723280000000001 SRR1005530 embryo RPL11 morpholino 0.8697440000000001 SRR535913 larvae krox mut 0.8647299999999999 SRR610741 3 dpf express Ras 0.8614790000000001 ERR023145 heart normal 0.86024 SRR1167753 embryo bacterial infection 0.8601780000000001 SRR065197 3 dpf U1C knockout 0.8568379999999999 SRR726541 5 dpf infection with Mycobacterium marinum 0.8425020000000001 SRR516132 skin male and 5 month 0.838406 SRR1291417 5 dpi injected marinum 0.8275309999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.7821170000000001 SRR535852 larvae hoxb1b mut 0.7751239999999999 SRR1647679 head kidney normal 0.772937 SRR1534349 larvae DMSO vehicle 0.7588590000000001 SRR776507 embryo normal 0.748394 SRR748491 germ ring normal 0.743193 SRR1188152 embryo Insulin 0.5 hpi 0.727577 SRR1648856 brain normal 0.721102 SRR726542 5 dpf infection with control 0.71832 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.711637 SRR700537 heart Gata4 morpholino 0.7115630000000001 SRR1291414 5 dpi normal 0.710526 SRR516127 skin male and 5 month 0.681512 SRR594771 endothelium normal 0.674353 SRR776508 embryo miR-146 knockdown 0.6625 SRR1021213 sphere stage normal 0.6611520000000001 SRR519722 4 dpf FETOH treatment 0.65174 SRR1708344 embryo MUTPS 0.6486350000000001 SRR519742 4 dpf VD3 treatment 0.646019 SRR1188160 embryo Insulin 4 hpi 0.644478 SRR1342217 embryo infection with Mycobacterium marinum 0.640412 SRR831692 embryo normal 0.629727 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.625898 SRR516134 skin male and 5 month 0.6138020000000001 SRR1708346 embryo SIBPS 0.6035739999999999 SRR527833 5 dpf normal 0.590187 SRR1299126 caudal fin One day time after treatment 0.5874510000000001 SRR516124 skin male and 3.5 year 0.566438 SRR1205154 5dpf transgenic sqET20 0.556344 SRR1167762 embryo ptpn6 morpholino 0.5374680000000001 SRR1167756 embryo mpeg1 morpholino 0.524898 SRR065196 3 dpf normal 0.521369 SRR1299128 caudal fin Three days time after treatment 0.5174880000000001 SRR633544 larvae exposed to cold stress 0.512831 SRR516130 skin male and 5 month 0.5002439999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.49239700000000003 SRR891504 liver normal 0.489183 SRR610740 3 dpf normal 0.479917 SRR1708345 embryo SIBAS 0.477933 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.464326 SRR519732 7 dpf FETOH treatment 0.46162600000000004 SRR1188148 embryo Control PBS 0.5 hpi 0.45971599999999996 SRR1021215 sphere stage Mzeomesa 0.45216300000000004 SRR527832 16-36 hpf normal 0.441013 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.42834700000000003 SRR1523214 embryo glut12 morpholino 0.409042 SRR1188156 embryo Control PBS 4 hpi 0.384385 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.379305 SRR519727 6 dpf FETOH treatment 0.37231 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.370895 SRR1647680 head kidney SVCV treatment 0.36689 SRR1299127 caudal fin Two days time after treatment 0.36488000000000004 SRR957181 heart normal 0.359004 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.353194 ERR023143 swim bladder normal 0.349599 SRR519747 6 dpf VD3 treatment 0.349544 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.34260100000000004 SRR1647683 spleen SVCV treatment 0.338127 SRR1299124 caudal fin Zero day time after treatment 0.33055999999999996 SRR519717 2 dpf FETOH treatment 0.316282 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.314758 SRR1647682 spleen normal 0.303692 SRR1104058 heart normal 0.29975 SRR535986 larvae nhsl1b mut 0.29945 SRR535978 larvae normal 0.297153 SRR516121 skin male and 3.5 year 0.287972 SRR700534 heart control morpholino 0.282973 SRR519752 7 dpf VD3 treatment 0.279093 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.273522 SRR1647681 head kidney SVCV treatment 0.265467 SRR038625 embryo traf6 morpholino 0.246279 SRR519737 2 dpf VD3 treatment 0.231386 SRR516125 skin male and 3.5 year 0.228868 SRR038626 embryo control morpholino and bacterial infection 0.222398 SRR516128 skin male and 5 month 0.22006399999999998 SRR1647684 spleen SVCV treatment 0.21119699999999997 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.210188 SRR1104059 heart kctd10 mut 0.204521 SRR1708343 embryo MUTAS 0.19066 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.178905 SRR776509 embryo Salmonella infected 0.175899 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.174745 SRR726540 5 dpf normal 0.147679 SRR891512 blood normal 0.147032 SRR891511 brain normal 0.13530599999999998 SRR941749 anterior pectoral fin normal 0.12413099999999999 SRR038624 embryo traf6 morpholino and bacterial infection 0.11427799999999999 SRR957180 heart 7 days after heart tip amputation 0.101074 SRR1648855 brain normal 0.0537062 SRR941753 posterior pectoral fin normal 0.05229630000000001 SRR800045 muscle normal 4.6127399999999995e-05