sample tissue condition fpkm SRR1299126 caudal fin One day time after treatment 21.0344 SRR748489 egg normal 19.167 SRR1299127 caudal fin Two days time after treatment 11.1929 SRR800037 egg normal 8.34711 SRR1569491 embryo normal 8.28213 SRR514028 retina control morpholino 6.8409699999999996 SRR527840 24hpf normal 6.807289999999999 SRR658533 bud normal 6.3600699999999994 SRR1648856 brain normal 6.11832 SRR658547 6 somite Gata5/6 morphant 5.99833 SRR658535 bud Gata5 morphant 5.98768 SRR535986 larvae nhsl1b mut 5.928669999999999 SRR527836 24hpf normal 5.54062 SRR1299125 caudal fin Half day time after treatment 4.94533 SRR535978 larvae normal 4.93783 SRR1299129 caudal fin Seven days time after treatment 4.86218 SRR514030 retina id2a morpholino 4.77919 SRR658537 bud Gata6 morphant 4.74828 SRR658539 bud Gata5/6 morphant 4.72026 SRR1299128 caudal fin Three days time after treatment 4.61017 SRR748488 sperm normal 4.40322 SRR658543 6 somite Gata5 morphan 4.396319999999999 SRR038625 embryo traf6 morpholino 4.28069 ERR023146 head kidney normal 4.02336 SRR038626 embryo control morpholino and bacterial infection 3.9319300000000004 SRR372800 2 dpf normal 3.89514 SRR038627 embryo control morpholino 3.8908199999999997 SRR594771 endothelium normal 3.5335099999999997 SRR749515 24 hpf eif3ha morphant 3.50529 SRR776508 embryo miR-146 knockdown 3.4934300000000005 SRR594769 blood normal 3.4613 SRR658541 6 somite normal 3.4512199999999997 SRR527844 24hpf normal 3.3048300000000004 SRR1569495 embryo normal 3.1787099999999997 SRR1648854 brain normal 3.07557 SRR658545 6 somite Gata6 morphant 3.07029 SRR886456 256 cell 4-thio-UTP metabolic labeling 2.99218 SRR372798 28 hpf normal 2.89843 SRR372796 bud normal 2.83707 SRR038624 embryo traf6 morpholino and bacterial infection 2.68745 SRR1648855 brain normal 2.6793 SRR1004786 larvae control morpholino 2.65176 SRR527835 tail normal 2.61364 SRR527832 16-36 hpf normal 2.5274900000000002 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.4483599999999996 SRR776507 embryo normal 2.4300900000000003 SRR797914 embryo pbx2/4-MO 2.41686 SRR749514 24 hpf normal 2.39698 SRR1291417 5 dpi injected marinum 2.02366 SRR1104059 heart kctd10 mut 1.9567400000000001 SRR535913 larvae krox mut 1.9272599999999998 SRR527833 5 dpf normal 1.82962 SRR942769 embryo myd88+/+ 1.8006099999999998 SRR1291414 5 dpi normal 1.7834599999999998 SRR372793 shield normal 1.74501 SRR797911 embryo prdm1-/- 1.73079 SRR776509 embryo Salmonella infected 1.7272 SRR726542 5 dpf infection with control 1.69593 SRR1562533 testis normal 1.69375 SRR1523211 embryo control morpholino 1.6246399999999999 SRR1004789 larvae impdh2 morpholino 1.59979 SRR630463 5 dpf normal 1.52734 SRR1004788 larvae impdh1b morpholino 1.47279 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.45194 SRR535943 larvae vangl mut 1.39639 SRR1299124 caudal fin Zero day time after treatment 1.37953 SRR535926 larvae normal 1.3693600000000001 SRR1342217 embryo infection with Mycobacterium marinum 1.35724 SRR1205154 5dpf transgenic sqET20 1.3525 SRR1647681 head kidney SVCV treatment 1.34817 SRR1205160 5dpf transgenic sqET20 and GFP+ 1.33965 SRR1708346 embryo SIBPS 1.33334 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.31369 SRR891512 blood normal 1.30986 SRR1004787 larvae impdh1a morpholino 1.3058299999999998 SRR1035984 13 hpf normal 1.30454 SRR1104058 heart normal 1.26655 SRR065196 3 dpf normal 1.23187 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.2237 SRR1035237 liver transgenic UHRF1 1.19668 SRR700537 heart Gata4 morpholino 1.17556 SRR1048061 pineal gland dark 1.1618600000000001 SRR630464 5 dpf injected epidermidis 1.1497600000000001 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.14772 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.13699 SRR1188148 embryo Control PBS 0.5 hpi 1.13279 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 1.09485 SRR1708344 embryo MUTPS 1.0875700000000001 SRR1647683 spleen SVCV treatment 1.0865200000000002 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.08291 SRR1188152 embryo Insulin 0.5 hpi 1.0753700000000002 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.07276 SRR1647680 head kidney SVCV treatment 1.06774 SRR372802 5 dpf normal 1.04182 SRR516130 skin male and 5 month 1.03514 SRR516125 skin male and 3.5 year 1.0348 SRR516122 skin male and 3.5 year 1.0279 SRR1005530 embryo RPL11 morpholino 1.01641 SRR1708345 embryo SIBAS 1.00252 SRR800046 sphere stage 5azaCyD treatment 1.0005 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.9886659999999999 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.969584 SRR1004785 larvae normal 0.960952 SRR797908 embryo normal 0.946061 SRR726541 5 dpf infection with Mycobacterium marinum 0.933019 SRR1167752 embryo normal 0.9267200000000001 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.9229930000000001 ERR023144 brain normal 0.915642 SRR592699 pineal gland normal 0.9080530000000001 SRR1188160 embryo Insulin 4 hpi 0.8889520000000001 ERR594416 retina transgenic flk1 0.886007 SRR535890 larvae normal 0.869455 SRR516127 skin male and 5 month 0.858605 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.845717 SRR065197 3 dpf U1C knockout 0.8441719999999999 ERR594418 retina transgenic flk1 and develop tumors 0.840981 SRR1621206 embryo normal 0.826651 SRR535849 larvae normal 0.80935 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.797149 SRR726540 5 dpf normal 0.770478 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.742608 SRR942764 embryo myd88-/- 0.72968 SRR700534 heart control morpholino 0.729449 SRR516131 skin male and 5 month 0.716302 SRR592698 pineal gland normal 0.710519 SRR610740 3 dpf normal 0.695071 SRR1035978 13 hpf rx3-/- 0.69418 SRR1028003 head normal 0.688483 SRR1167753 embryo bacterial infection 0.6831520000000001 SRR516133 skin male and 5 month 0.682154 SRR1342216 embryo norml 0.681836 SRR831692 embryo normal 0.681148 ERR023143 swim bladder normal 0.665285 SRR1039571 gastrointestinal diet 0.1 NPM 0.664619 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.662131 SRR516121 skin male and 3.5 year 0.657959 SRR516128 skin male and 5 month 0.653405 SRR592701 pineal gland normal 0.648066 ERR023145 heart normal 0.6304270000000001 SRR535850 larvae hoxb1b mut 0.607116 SRR1562529 intestine and pancreas normal 0.600453 SRR1167762 embryo ptpn6 morpholino 0.600247 SRR516124 skin male and 3.5 year 0.5859489999999999 SRR519717 2 dpf FETOH treatment 0.584765 SRR519722 4 dpf FETOH treatment 0.5787479999999999 ERR594417 retina normal 0.572466 SRR1188156 embryo Control PBS 4 hpi 0.566836 SRR1647682 spleen normal 0.562667 SRR1565819 brain normal 0.5616300000000001 SRR1021215 sphere stage Mzeomesa 0.561062 SRR592700 pineal gland normal 0.558212 SRR941749 anterior pectoral fin normal 0.5516979999999999 SRR535852 larvae hoxb1b mut 0.5483210000000001 SRR610741 3 dpf express Ras 0.542219 SRR1647679 head kidney normal 0.537894 SRR633544 larvae exposed to cold stress 0.510336 SRR1523214 embryo glut12 morpholino 0.5041439999999999 SRR1565813 brain normal 0.503583 SRR535847 larvae normal 0.5035149999999999 SRR1039573 gastrointestinal diet 0.75 NPM 0.49927299999999997 SRR1342218 embryo marco morpholino 0.474867 SRR891511 brain normal 0.473891 SRR1021213 sphere stage normal 0.462938 SRR1049814 256 cell normal 0.459958 SRR519747 6 dpf VD3 treatment 0.45177700000000004 SRR519737 2 dpf VD3 treatment 0.448325 SRR516126 skin male and 5 month 0.43522299999999997 SRR516132 skin male and 5 month 0.43376899999999996 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.400831 SRR519742 4 dpf VD3 treatment 0.377635 SRR800043 sphere stage normal 0.374078 SRR1565811 brain normal 0.373388 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.373377 SRR1708343 embryo MUTAS 0.37103600000000003 SRR1048059 pineal gland light 0.36976 SRR1565805 brain normal 0.357673 SRR801556 embryo RPS19 and p53 morpholino 0.34338 SRR748490 1 kcell normal 0.332071 SRR1565817 brain normal 0.324218 SRR519752 7 dpf VD3 treatment 0.32411599999999996 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.31648200000000004 SRR801555 embryo RPS19 morpholino 0.284174 SRR1565809 brain normal 0.280616 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.279066 SRR1167756 embryo mpeg1 morpholino 0.27703099999999997 SRR1647684 spleen SVCV treatment 0.272235 SRR592703 pineal gland normal 0.25367399999999996 SRR516134 skin male and 5 month 0.241202 SRR633550 larvae exposed to hypoxia stress 0.234421 SRR1565815 brain normal 0.231449 SRR519727 6 dpf FETOH treatment 0.224649 SRR610742 3 dpf express NICD 0.21608400000000003 SRR891510 muscle normal 0.184554 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.179196 SRR519732 7 dpf FETOH treatment 0.17541099999999998 SRR592702 pineal gland normal 0.17156300000000002 SRR748491 germ ring normal 0.164266 SRR372791 dome normal 0.155616 SRR516123 skin male and 3.5 year 0.154385 SRR1565807 brain normal 0.149956 SRR527834 head normal 0.149641 SRR1028004 head normal 0.14865899999999999 SRR1534349 larvae DMSO vehicle 0.11983599999999998 SRR633516 larvae normal 0.11544600000000001 SRR372787 2-4 cell normal 0.11539400000000001 SRR957181 heart normal 0.105848 SRR516129 skin male and 5 month 0.0984592 SRR1035239 liver transgenic mCherry control 0.0903297 SRR941753 posterior pectoral fin normal 0.0902142 SRR957180 heart 7 days after heart tip amputation 0.050676599999999995 SRR891495 heart normal 0.03365630000000001 SRR1562532 spleen normal 0.0201379