sample tissue condition fpkm ERR023146 head kidney normal 52.0422 ERR023143 swim bladder normal 48.4964 SRR1035239 liver transgenic mCherry control 26.8159 SRR1562530 liver normal 24.8886 SRR1035237 liver transgenic UHRF1 24.2187 SRR1021213 sphere stage normal 21.1452 ERR023145 heart normal 19.1061 SRR372791 dome normal 18.9014 SRR372793 shield normal 17.7493 SRR700534 heart control morpholino 16.797 SRR1021215 sphere stage Mzeomesa 16.5879 SRR748491 germ ring normal 15.2718 SRR1621206 embryo normal 14.8702 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 14.5496 SRR1299128 caudal fin Three days time after treatment 13.4545 SRR1299129 caudal fin Seven days time after treatment 13.2528 SRR372789 1K cell normal 12.4457 SRR800046 sphere stage 5azaCyD treatment 12.1144 SRR1049814 256 cell normal 11.3111 SRR800049 sphere stage control treatment 11.1552 SRR1299125 caudal fin Half day time after treatment 11.0662 SRR800043 sphere stage normal 9.784460000000001 SRR1299127 caudal fin Two days time after treatment 9.44641 SRR372796 bud normal 9.29448 SRR1562529 intestine and pancreas normal 9.01569 SRR1708346 embryo SIBPS 8.97488 SRR1708344 embryo MUTPS 8.748389999999999 SRR700537 heart Gata4 morpholino 8.38406 SRR886455 128 cell 4-thio-UTP metabolic labeling 8.15583 SRR527840 24hpf normal 8.12181 SRR800037 egg normal 7.809880000000001 SRR886457 512 cell 4-thio-UTP metabolic labeling 7.783410000000001 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 7.698289999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 7.50385 SRR797908 embryo normal 7.435510000000001 SRR594771 endothelium normal 7.37595 SRR797911 embryo prdm1-/- 7.336939999999999 SRR886456 256 cell 4-thio-UTP metabolic labeling 7.33593 SRR516127 skin male and 5 month 7.2179899999999995 SRR1647683 spleen SVCV treatment 7.212610000000001 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 7.0420300000000005 SRR1647681 head kidney SVCV treatment 7.02941 SRR748490 1 kcell normal 7.0166 SRR1205160 5dpf transgenic sqET20 and GFP+ 7.015680000000001 SRR1299126 caudal fin One day time after treatment 7.00241 SRR1647684 spleen SVCV treatment 6.96536 ERR023144 brain normal 6.94462 SRR1562532 spleen normal 6.923139999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 6.91908 SRR658541 6 somite normal 6.866510000000001 SRR527844 24hpf normal 6.840669999999999 SRR1708345 embryo SIBAS 6.60343 SRR594769 blood normal 6.49578 SRR527835 tail normal 6.47061 SRR1039571 gastrointestinal diet 0.1 NPM 6.15393 SRR1035978 13 hpf rx3-/- 6.07881 SRR527836 24hpf normal 6.0082699999999996 SRR1299124 caudal fin Zero day time after treatment 5.90106 SRR1167763 embryo ptpn6 morpholino and bacterial infection 5.86609 SRR797914 embryo pbx2/4-MO 5.839519999999999 SRR535978 larvae normal 5.82417 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.78379 SRR658545 6 somite Gata6 morphant 5.6417 SRR372802 5 dpf normal 5.5917699999999995 SRR1291417 5 dpi injected marinum 5.46363 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 5.45549 SRR516133 skin male and 5 month 5.307 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 5.2394099999999995 SRR1035984 13 hpf normal 5.16556 SRR1004788 larvae impdh1b morpholino 5.06086 SRR516131 skin male and 5 month 4.99676 SRR658543 6 somite Gata5 morphan 4.97503 SRR372800 2 dpf normal 4.92833 SRR658533 bud normal 4.88478 SRR372798 28 hpf normal 4.76342 SRR1647682 spleen normal 4.70978 SRR516128 skin male and 5 month 4.69485 SRR749515 24 hpf eif3ha morphant 4.6704300000000005 SRR516126 skin male and 5 month 4.66258 SRR658539 bud Gata5/6 morphant 4.5532900000000005 SRR942764 embryo myd88-/- 4.531280000000001 SRR749514 24 hpf normal 4.5296199999999995 SRR658537 bud Gata6 morphant 4.48947 SRR658535 bud Gata5 morphant 4.48285 SRR1647679 head kidney normal 4.45945 SRR658547 6 somite Gata5/6 morphant 4.4006 SRR1004786 larvae control morpholino 4.37818 SRR1569491 embryo normal 4.33875 SRR516134 skin male and 5 month 4.3309 SRR1342218 embryo marco morpholino 4.23198 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.21716 SRR1167752 embryo normal 4.1538 SRR1104059 heart kctd10 mut 4.107819999999999 SRR535986 larvae nhsl1b mut 4.0743 SRR1708343 embryo MUTAS 4.05187 SRR1167753 embryo bacterial infection 4.045059999999999 SRR1342217 embryo infection with Mycobacterium marinum 4.01944 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.96587 SRR610741 3 dpf express Ras 3.9580900000000003 SRR1523211 embryo control morpholino 3.95782 SRR535926 larvae normal 3.91468 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.9095199999999997 SRR516130 skin male and 5 month 3.89515 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.86535 SRR776508 embryo miR-146 knockdown 3.8645699999999996 SRR1005529 embryo control morpholino 3.8253199999999996 SRR748488 sperm normal 3.8234800000000004 SRR801554 embryo control morpholino 3.8195699999999997 SRR1167762 embryo ptpn6 morpholino 3.7710000000000004 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.7701800000000003 SRR1562533 testis normal 3.77008 SRR630464 5 dpf injected epidermidis 3.7094099999999997 SRR942769 embryo myd88+/+ 3.66684 SRR1028002 head normal 3.6646099999999997 SRR776509 embryo Salmonella infected 3.6354900000000003 SRR1523214 embryo glut12 morpholino 3.6309 SRR1342216 embryo norml 3.58377 SRR535943 larvae vangl mut 3.52124 SRR776507 embryo normal 3.41906 SRR831692 embryo normal 3.4095400000000002 SRR1167756 embryo mpeg1 morpholino 3.3731400000000002 SRR372787 2-4 cell normal 3.3634 SRR1004785 larvae normal 3.32542 SRR535847 larvae normal 3.3074 SRR535851 larvae normal 3.3070699999999995 SRR1647680 head kidney SVCV treatment 3.27209 SRR891504 liver normal 3.25147 SRR1534351 larvae 500 ug/l BDE47 treatment 3.20227 SRR1205154 5dpf transgenic sqET20 3.12456 SRR535850 larvae hoxb1b mut 3.10517 SRR535849 larvae normal 3.0478099999999997 SRR1188156 embryo Control PBS 4 hpi 3.00124 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.95378 SRR516121 skin male and 3.5 year 2.94791 SRR1569495 embryo normal 2.9110099999999997 SRR801555 embryo RPS19 morpholino 2.89177 SRR1039573 gastrointestinal diet 0.75 NPM 2.84033 SRR535913 larvae krox mut 2.8113200000000003 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.79572 SRR630463 5 dpf normal 2.77526 SRR1104058 heart normal 2.76123 SRR1005530 embryo RPL11 morpholino 2.72315 SRR1291414 5 dpi normal 2.66249 SRR535890 larvae normal 2.62142 SRR535852 larvae hoxb1b mut 2.60239 SRR516132 skin male and 5 month 2.55882 SRR1028004 head normal 2.54887 SRR1188160 embryo Insulin 4 hpi 2.45859 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.43053 SRR1188148 embryo Control PBS 0.5 hpi 2.4102 SRR610742 3 dpf express NICD 2.3876 SRR516125 skin male and 3.5 year 2.38295 SRR535848 larvae hoxb1b mut 2.37058 SRR516123 skin male and 3.5 year 2.36769 SRR1004789 larvae impdh2 morpholino 2.36631 SRR516129 skin male and 5 month 2.3616900000000003 SRR516122 skin male and 3.5 year 2.35793 SRR1648856 brain normal 2.3138 SRR941749 anterior pectoral fin normal 2.30315 SRR1188152 embryo Insulin 0.5 hpi 2.2854200000000002 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2.21433 SRR801556 embryo RPS19 and p53 morpholino 2.1803 SRR1562531 muscle normal 2.1769700000000003 SRR610740 3 dpf normal 2.17614 SRR1562528 eye normal 2.11618 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.1159 SRR957180 heart 7 days after heart tip amputation 2.00411 SRR1028003 head normal 1.97648 SRR514030 retina id2a morpholino 1.92661 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.91631 SRR1534349 larvae DMSO vehicle 1.9112 SRR1565807 brain normal 1.8744599999999998 SRR1565805 brain normal 1.8249799999999998 SRR1534350 larvae 5 ug/l BDE47 treatment 1.8053700000000001 SRR065196 3 dpf normal 1.78352 SRR519752 7 dpf VD3 treatment 1.7331400000000001 SRR633550 larvae exposed to hypoxia stress 1.71816 SRR1565813 brain normal 1.6787 SRR633516 larvae normal 1.66683 SRR038627 embryo control morpholino 1.64035 SRR516135 skin male and 5 month 1.6278 SRR726540 5 dpf normal 1.62768 SRR941753 posterior pectoral fin normal 1.62605 SRR1648854 brain normal 1.61178 SRR1565817 brain normal 1.59794 SRR065197 3 dpf U1C knockout 1.58768 SRR516124 skin male and 3.5 year 1.58076 SRR1565815 brain normal 1.57522 SRR1004787 larvae impdh1a morpholino 1.5506799999999998 ERR594418 retina transgenic flk1 and develop tumors 1.51162 SRR1565819 brain normal 1.5086899999999999 SRR633544 larvae exposed to cold stress 1.50865 ERR594416 retina transgenic flk1 1.49585 SRR527832 16-36 hpf normal 1.49195 SRR1565811 brain normal 1.48221 SRR038626 embryo control morpholino and bacterial infection 1.3659999999999999 SRR514028 retina control morpholino 1.32988 SRR527833 5 dpf normal 1.30554 SRR748489 egg normal 1.305 SRR592701 pineal gland normal 1.2857299999999998 SRR1565809 brain normal 1.27452 SRR1648855 brain normal 1.24579 SRR038624 embryo traf6 morpholino and bacterial infection 1.21787 SRR519747 6 dpf VD3 treatment 1.17774 SRR519742 4 dpf VD3 treatment 1.11849 SRR726541 5 dpf infection with Mycobacterium marinum 1.11575 SRR519722 4 dpf FETOH treatment 1.1018 SRR519732 7 dpf FETOH treatment 1.0589600000000001 SRR519727 6 dpf FETOH treatment 1.05562 SRR891495 heart normal 1.05413 SRR038625 embryo traf6 morpholino 1.0502799999999999 SRR519737 2 dpf VD3 treatment 1.03703 SRR592699 pineal gland normal 0.999223 SRR592700 pineal gland normal 0.9758690000000001 SRR527834 head normal 0.9677709999999999 SRR592702 pineal gland normal 0.9559350000000001 SRR519717 2 dpf FETOH treatment 0.9398049999999999 ERR594417 retina normal 0.901502 SRR1048059 pineal gland light 0.891288 SRR800045 muscle normal 0.890964 SRR726542 5 dpf infection with control 0.885869 SRR957181 heart normal 0.868483 SRR891512 blood normal 0.787458 SRR1048061 pineal gland dark 0.72956 SRR592703 pineal gland normal 0.715799 SRR891510 muscle normal 0.661837 SRR592698 pineal gland normal 0.443198 SRR891511 brain normal 0.27838