sample tissue condition fpkm SRR1205160 5dpf transgenic sqET20 and GFP+ 33.2648 SRR1708346 embryo SIBPS 25.498 SRR1299127 caudal fin Two days time after treatment 23.0785 SRR527836 24hpf normal 22.2142 SRR1299129 caudal fin Seven days time after treatment 21.2914 SRR527840 24hpf normal 21.1119 SRR1299128 caudal fin Three days time after treatment 20.0783 SRR1299126 caudal fin One day time after treatment 19.3508 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 19.3264 SRR1708344 embryo MUTPS 17.3079 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 16.5082 SRR658547 6 somite Gata5/6 morphant 16.0176 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 14.3457 SRR594771 endothelium normal 14.0718 SRR749515 24 hpf eif3ha morphant 12.9038 SRR1299125 caudal fin Half day time after treatment 12.6279 SRR658545 6 somite Gata6 morphant 12.2456 SRR527844 24hpf normal 11.1567 ERR023143 swim bladder normal 10.9226 SRR658543 6 somite Gata5 morphan 10.8789 SRR658541 6 somite normal 10.7108 SRR516121 skin male and 3.5 year 10.315 ERR023146 head kidney normal 10.2485 SRR516124 skin male and 3.5 year 9.58945 SRR535913 larvae krox mut 9.5732 SRR1039573 gastrointestinal diet 0.75 NPM 9.38604 SRR535926 larvae normal 9.24211 SRR535943 larvae vangl mut 9.20457 ERR594417 retina normal 8.99992 SRR1708345 embryo SIBAS 8.96707 SRR535978 larvae normal 8.9199 SRR658539 bud Gata5/6 morphant 8.613430000000001 SRR1039571 gastrointestinal diet 0.1 NPM 8.42952 SRR1004786 larvae control morpholino 8.34233 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.33906 SRR516132 skin male and 5 month 8.23453 SRR776509 embryo Salmonella infected 8.06983 SRR658537 bud Gata6 morphant 8.03355 SRR658533 bud normal 8.02716 SRR516128 skin male and 5 month 7.97917 SRR776507 embryo normal 7.792039999999999 SRR516122 skin male and 3.5 year 7.76652 SRR516123 skin male and 3.5 year 7.73257 SRR535890 larvae normal 7.7287300000000005 SRR527832 16-36 hpf normal 7.58644 SRR776508 embryo miR-146 knockdown 7.549869999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 7.28052 SRR1569491 embryo normal 7.1069 SRR1342218 embryo marco morpholino 6.98614 SRR749514 24 hpf normal 6.68887 SRR535986 larvae nhsl1b mut 6.65946 SRR942764 embryo myd88-/- 6.64757 SRR1299124 caudal fin Zero day time after treatment 6.6458699999999995 SRR516125 skin male and 3.5 year 6.5720600000000005 SRR1523211 embryo control morpholino 6.50861 SRR1188148 embryo Control PBS 0.5 hpi 6.48223 SRR1708343 embryo MUTAS 6.41155 SRR1188152 embryo Insulin 0.5 hpi 6.35853 SRR797914 embryo pbx2/4-MO 6.23088 SRR658535 bud Gata5 morphant 6.228 SRR1035978 13 hpf rx3-/- 6.1826300000000005 SRR797908 embryo normal 6.163959999999999 SRR1167762 embryo ptpn6 morpholino 6.13836 SRR941753 posterior pectoral fin normal 5.976430000000001 SRR1342217 embryo infection with Mycobacterium marinum 5.961880000000001 SRR038627 embryo control morpholino 5.95193 SRR1523214 embryo glut12 morpholino 5.86648 SRR1291414 5 dpi normal 5.84615 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.82147 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 5.77651 SRR1167752 embryo normal 5.69787 SRR797911 embryo prdm1-/- 5.51855 SRR038625 embryo traf6 morpholino 5.42185 SRR1004788 larvae impdh1b morpholino 5.40952 SRR1167753 embryo bacterial infection 5.3266599999999995 SRR1342216 embryo norml 5.31475 SRR942769 embryo myd88+/+ 5.3048 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 5.29959 SRR941749 anterior pectoral fin normal 5.28758 SRR1167756 embryo mpeg1 morpholino 5.25279 SRR516133 skin male and 5 month 5.236000000000001 SRR797917 embryo pbx2/4-MO and prdm1-/- 5.1769099999999995 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.070530000000001 SRR700537 heart Gata4 morpholino 5.01556 SRR610742 3 dpf express NICD 4.95331 SRR038624 embryo traf6 morpholino and bacterial infection 4.9532 SRR1291417 5 dpi injected marinum 4.93985 SRR630463 5 dpf normal 4.79669 SRR1188156 embryo Control PBS 4 hpi 4.7668800000000005 SRR1035984 13 hpf normal 4.72259 SRR516129 skin male and 5 month 4.58134 SRR516126 skin male and 5 month 4.5652 SRR630464 5 dpf injected epidermidis 4.5619 SRR038626 embryo control morpholino and bacterial infection 4.53434 SRR1004785 larvae normal 4.48421 SRR1569495 embryo normal 4.46662 SRR1004789 larvae impdh2 morpholino 4.34541 SRR527833 5 dpf normal 4.28531 SRR516131 skin male and 5 month 4.25548 SRR1004787 larvae impdh1a morpholino 4.157369999999999 SRR831692 embryo normal 4.133769999999999 SRR516127 skin male and 5 month 4.11284 SRR519742 4 dpf VD3 treatment 3.94615 SRR1647681 head kidney SVCV treatment 3.94535 SRR1188160 embryo Insulin 4 hpi 3.93934 SRR1562528 eye normal 3.8547800000000003 SRR519722 4 dpf FETOH treatment 3.7798199999999995 SRR1028003 head normal 3.67549 SRR610740 3 dpf normal 3.64455 SRR1647680 head kidney SVCV treatment 3.6215900000000003 SRR592702 pineal gland normal 3.6212400000000002 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.5475 SRR610741 3 dpf express Ras 3.50825 SRR519737 2 dpf VD3 treatment 3.48941 SRR1028004 head normal 3.4866900000000003 SRR1035239 liver transgenic mCherry control 3.48496 SRR519717 2 dpf FETOH treatment 3.41876 SRR535847 larvae normal 3.3267300000000004 SRR633550 larvae exposed to hypoxia stress 3.28712 SRR535852 larvae hoxb1b mut 3.24206 SRR594769 blood normal 3.21402 SRR1647679 head kidney normal 3.14747 SRR519727 6 dpf FETOH treatment 3.11538 SRR633544 larvae exposed to cold stress 3.06431 SRR592698 pineal gland normal 2.99363 SRR535850 larvae hoxb1b mut 2.9792400000000003 SRR516134 skin male and 5 month 2.9537299999999997 SRR1562533 testis normal 2.9453099999999997 SRR519747 6 dpf VD3 treatment 2.9437900000000004 SRR065197 3 dpf U1C knockout 2.91228 SRR516130 skin male and 5 month 2.8597099999999998 SRR726542 5 dpf infection with control 2.85659 SRR1028002 head normal 2.82775 SRR535851 larvae normal 2.69239 SRR700534 heart control morpholino 2.67521 SRR535848 larvae hoxb1b mut 2.66922 SRR1104059 heart kctd10 mut 2.6162 SRR1104058 heart normal 2.61164 SRR633516 larvae normal 2.55914 SRR065196 3 dpf normal 2.5573200000000003 SRR726540 5 dpf normal 2.49885 SRR1534349 larvae DMSO vehicle 2.49359 SRR519732 7 dpf FETOH treatment 2.42575 SRR592699 pineal gland normal 2.39454 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 2.38642 SRR1562529 intestine and pancreas normal 2.38299 SRR1205154 5dpf transgenic sqET20 2.35133 SRR535849 larvae normal 2.33996 SRR592703 pineal gland normal 2.29724 ERR023145 heart normal 2.2766900000000003 SRR1005529 embryo control morpholino 2.20517 SRR801554 embryo control morpholino 2.20185 SRR592700 pineal gland normal 2.14262 SRR519752 7 dpf VD3 treatment 2.1291 SRR516135 skin male and 5 month 2.12292 SRR801556 embryo RPS19 and p53 morpholino 2.11119 SRR527835 tail normal 2.10529 SRR1534350 larvae 5 ug/l BDE47 treatment 2.02855 SRR592701 pineal gland normal 2.00924 SRR1035237 liver transgenic UHRF1 1.99082 SRR726541 5 dpf infection with Mycobacterium marinum 1.9432599999999998 SRR527834 head normal 1.86753 SRR514030 retina id2a morpholino 1.85493 SRR1562530 liver normal 1.78282 SRR1048061 pineal gland dark 1.73945 SRR801555 embryo RPS19 morpholino 1.7274200000000002 SRR514028 retina control morpholino 1.6889299999999998 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.6824299999999999 ERR594416 retina transgenic flk1 1.6638099999999998 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.57863 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 1.56069 SRR1048059 pineal gland light 1.42916 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.34887 SRR1021215 sphere stage Mzeomesa 1.34449 SRR1534351 larvae 500 ug/l BDE47 treatment 1.11943 SRR891512 blood normal 1.11438 SRR1005530 embryo RPL11 morpholino 1.10156 SRR800045 muscle normal 0.915309 ERR594418 retina transgenic flk1 and develop tumors 0.886799 SRR1021213 sphere stage normal 0.80178 ERR023144 brain normal 0.547838 SRR1562531 muscle normal 0.527204 SRR748491 germ ring normal 0.49573999999999996 SRR1562532 spleen normal 0.46098999999999996 SRR748489 egg normal 0.390426 SRR1565819 brain normal 0.38190999999999997 SRR1565805 brain normal 0.35144200000000003 SRR1565807 brain normal 0.346531 SRR1565809 brain normal 0.34054 SRR1565811 brain normal 0.33133 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.31550500000000004 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.288594 SRR1565813 brain normal 0.279767 SRR1565817 brain normal 0.255711 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.252208 SRR748488 sperm normal 0.23644 SRR1647683 spleen SVCV treatment 0.23476599999999997 SRR1565815 brain normal 0.23123200000000002 SRR891511 brain normal 0.20214100000000002 SRR1647682 spleen normal 0.19225 SRR1647684 spleen SVCV treatment 0.183585 SRR800046 sphere stage 5azaCyD treatment 0.176949 SRR748490 1 kcell normal 0.15650799999999998 SRR800043 sphere stage normal 0.14484 SRR891510 muscle normal 0.133373 SRR800037 egg normal 0.12478099999999999 SRR891495 heart normal 0.123504 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.11965 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.10331400000000002 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.0345499 SRR800049 sphere stage control treatment 0.028075599999999996 SRR372798 28 hpf normal 0.022843400000000003 SRR372796 bud normal 0.0223158 SRR1648856 brain normal 0.0166234 SRR372800 2 dpf normal 0.0036561999999999996 SRR1049814 256 cell normal 0.00247749 SRR1621206 embryo normal 0.00150277