sample tissue condition fpkm SRR886457 512 cell 4-thio-UTP metabolic labeling 108.54 SRR886455 128 cell 4-thio-UTP metabolic labeling 104.495 SRR886456 256 cell 4-thio-UTP metabolic labeling 91.7892 SRR527835 tail normal 43.2649 SRR594769 blood normal 20.7615 SRR891495 heart normal 18.9946 SRR1035978 13 hpf rx3-/- 15.5823 SRR594771 endothelium normal 15.0718 SRR1035981 13 hpf rx3+/+ or rx3+/- 14.8188 SRR516129 skin male and 5 month 14.7147 SRR516131 skin male and 5 month 14.6382 SRR519752 7 dpf VD3 treatment 13.376 SRR516128 skin male and 5 month 13.127 SRR527833 5 dpf normal 12.9686 ERR023143 swim bladder normal 11.297 SRR658547 6 somite Gata5/6 morphant 11.2152 SRR519747 6 dpf VD3 treatment 10.4515 SRR658543 6 somite Gata5 morphan 10.4362 SRR527834 head normal 10.2935 SRR658545 6 somite Gata6 morphant 9.64509 SRR658535 bud Gata5 morphant 9.53187 SRR658541 6 somite normal 9.51759 SRR658537 bud Gata6 morphant 9.359110000000001 SRR527832 16-36 hpf normal 9.30159 SRR516133 skin male and 5 month 9.05953 SRR800046 sphere stage 5azaCyD treatment 9.03546 SRR1035984 13 hpf normal 9.01346 SRR519732 7 dpf FETOH treatment 8.83189 SRR516130 skin male and 5 month 8.81949 SRR658533 bud normal 8.78165 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.73698 SRR519727 6 dpf FETOH treatment 8.51084 SRR1021213 sphere stage normal 8.500160000000001 SRR516121 skin male and 3.5 year 8.43241 SRR516122 skin male and 3.5 year 8.31925 SRR519737 2 dpf VD3 treatment 8.29278 SRR519722 4 dpf FETOH treatment 8.27918 ERR023145 heart normal 8.25577 SRR519717 2 dpf FETOH treatment 8.15938 SRR800045 muscle normal 7.99695 SRR801556 embryo RPS19 and p53 morpholino 7.915030000000001 SRR516134 skin male and 5 month 7.8943 SRR658539 bud Gata5/6 morphant 7.78367 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 7.722110000000001 SRR519742 4 dpf VD3 treatment 7.48233 SRR516126 skin male and 5 month 7.28675 SRR776507 embryo normal 7.27128 SRR038624 embryo traf6 morpholino and bacterial infection 7.216480000000001 SRR1035239 liver transgenic mCherry control 7.20689 ERR023144 brain normal 7.15137 SRR1005530 embryo RPL11 morpholino 7.13125 SRR749514 24 hpf normal 7.086060000000001 SRR1004785 larvae normal 7.035480000000001 SRR516123 skin male and 3.5 year 7.00203 SRR776508 embryo miR-146 knockdown 6.96041 SRR516125 skin male and 3.5 year 6.94919 SRR776509 embryo Salmonella infected 6.909669999999999 SRR748490 1 kcell normal 6.83445 SRR1104059 heart kctd10 mut 6.52031 SRR516124 skin male and 3.5 year 6.49684 SRR1708343 embryo MUTAS 6.27002 SRR527836 24hpf normal 6.18665 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 6.11764 ERR023146 head kidney normal 5.98906 SRR941749 anterior pectoral fin normal 5.97653 SRR801555 embryo RPS19 morpholino 5.94949 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.92925 SRR1021215 sphere stage Mzeomesa 5.86808 SRR516127 skin male and 5 month 5.758780000000001 SRR038627 embryo control morpholino 5.7115 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 5.64485 SRR1004788 larvae impdh1b morpholino 5.64048 SRR527840 24hpf normal 5.57845 SRR1647679 head kidney normal 5.56479 SRR514030 retina id2a morpholino 5.55008 SRR749515 24 hpf eif3ha morphant 5.47431 SRR1647681 head kidney SVCV treatment 5.42702 SRR516135 skin male and 5 month 5.3977 SRR1167752 embryo normal 5.34218 SRR800049 sphere stage control treatment 5.32995 SRR1004787 larvae impdh1a morpholino 5.28529 SRR1708345 embryo SIBAS 5.24943 SRR1004786 larvae control morpholino 5.239669999999999 SRR1569491 embryo normal 5.11602 SRR1205154 5dpf transgenic sqET20 5.10113 SRR748488 sperm normal 4.99517 SRR1647683 spleen SVCV treatment 4.9577800000000005 SRR726542 5 dpf infection with control 4.931769999999999 SRR1647684 spleen SVCV treatment 4.8594800000000005 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4.79181 SRR1188160 embryo Insulin 4 hpi 4.74222 SRR1167763 embryo ptpn6 morpholino and bacterial infection 4.68577 SRR1188148 embryo Control PBS 0.5 hpi 4.6738800000000005 SRR700534 heart control morpholino 4.67272 SRR1167762 embryo ptpn6 morpholino 4.62445 SRR1028003 head normal 4.6204 SRR1647682 spleen normal 4.61885 SRR1299129 caudal fin Seven days time after treatment 4.58148 SRR038626 embryo control morpholino and bacterial infection 4.56681 SRR630464 5 dpf injected epidermidis 4.49967 SRR1342216 embryo norml 4.477 SRR1028004 head normal 4.43878 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4.35884 SRR748489 egg normal 4.34178 SRR1205160 5dpf transgenic sqET20 and GFP+ 4.315180000000001 SRR1708346 embryo SIBPS 4.23531 SRR516132 skin male and 5 month 4.19629 SRR941753 posterior pectoral fin normal 4.17876 SRR1569495 embryo normal 4.139869999999999 SRR1188156 embryo Control PBS 4 hpi 4.13733 SRR630463 5 dpf normal 4.123880000000001 SRR797911 embryo prdm1-/- 4.10503 SRR1167753 embryo bacterial infection 4.10384 SRR592702 pineal gland normal 4.08246 SRR1005529 embryo control morpholino 4.0709599999999995 SRR801554 embryo control morpholino 4.06447 SRR1708344 embryo MUTPS 4.04338 SRR1039571 gastrointestinal diet 0.1 NPM 4.0155 SRR942769 embryo myd88+/+ 3.9971900000000002 SRR038625 embryo traf6 morpholino 3.98639 SRR1647680 head kidney SVCV treatment 3.98179 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.9738300000000004 SRR797908 embryo normal 3.96955 SRR1104058 heart normal 3.90496 SRR1188152 embryo Insulin 0.5 hpi 3.86055 SRR1565811 brain normal 3.84081 SRR1291417 5 dpi injected marinum 3.81734 SRR1342218 embryo marco morpholino 3.8152800000000004 SRR700537 heart Gata4 morpholino 3.7877 SRR592699 pineal gland normal 3.7866699999999995 SRR535978 larvae normal 3.74554 SRR1299128 caudal fin Three days time after treatment 3.70945 SRR726541 5 dpf infection with Mycobacterium marinum 3.6928300000000003 SRR1523211 embryo control morpholino 3.61674 SRR1342217 embryo infection with Mycobacterium marinum 3.58052 SRR1565809 brain normal 3.5677199999999996 SRR1167756 embryo mpeg1 morpholino 3.51366 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.46921 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.42034 SRR1299125 caudal fin Half day time after treatment 3.32458 SRR748491 germ ring normal 3.28053 SRR592698 pineal gland normal 3.25351 SRR1028002 head normal 3.21123 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.20421 SRR527844 24hpf normal 3.20162 SRR1299127 caudal fin Two days time after treatment 3.1603 SRR1291414 5 dpi normal 3.15659 SRR891511 brain normal 3.15538 SRR726540 5 dpf normal 3.11239 SRR1004789 larvae impdh2 morpholino 3.1067 SRR633516 larvae normal 3.07495 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 3.00753 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.99055 SRR535913 larvae krox mut 2.97205 SRR1565813 brain normal 2.95197 SRR1562530 liver normal 2.93296 SRR1299124 caudal fin Zero day time after treatment 2.92445 SRR797914 embryo pbx2/4-MO 2.8968599999999998 SRR1565807 brain normal 2.84806 SRR610742 3 dpf express NICD 2.77042 SRR535890 larvae normal 2.75706 ERR594418 retina transgenic flk1 and develop tumors 2.75703 SRR1523214 embryo glut12 morpholino 2.74234 SRR535943 larvae vangl mut 2.73257 SRR633550 larvae exposed to hypoxia stress 2.72749 SRR891510 muscle normal 2.6934099999999996 SRR065196 3 dpf normal 2.6882 SRR1565805 brain normal 2.68608 SRR1534351 larvae 500 ug/l BDE47 treatment 2.68086 SRR1035237 liver transgenic UHRF1 2.6271 SRR535926 larvae normal 2.59386 SRR1565815 brain normal 2.58243 SRR800043 sphere stage normal 2.5773599999999997 SRR535847 larvae normal 2.55484 SRR1048059 pineal gland light 2.5299 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.50463 SRR1299126 caudal fin One day time after treatment 2.49427 SRR891512 blood normal 2.48184 SRR942764 embryo myd88-/- 2.4245200000000002 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.41485 SRR592703 pineal gland normal 2.40174 SRR592701 pineal gland normal 2.38747 SRR535849 larvae normal 2.34554 SRR610741 3 dpf express Ras 2.34242 SRR592700 pineal gland normal 2.29299 SRR514028 retina control morpholino 2.26061 ERR594417 retina normal 2.2444599999999997 SRR1562531 muscle normal 2.23754 SRR1039573 gastrointestinal diet 0.75 NPM 2.16672 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.14221 ERR594416 retina transgenic flk1 2.10502 SRR1565819 brain normal 2.03725 SRR1534349 larvae DMSO vehicle 1.90137 SRR633544 larvae exposed to cold stress 1.8708 SRR1562529 intestine and pancreas normal 1.79988 SRR1534350 larvae 5 ug/l BDE47 treatment 1.6692799999999999 SRR831692 embryo normal 1.61249 SRR535852 larvae hoxb1b mut 1.5457299999999998 SRR535848 larvae hoxb1b mut 1.45938 SRR891504 liver normal 1.40822 SRR610740 3 dpf normal 1.38368 SRR535986 larvae nhsl1b mut 1.38161 SRR1565817 brain normal 1.35309 SRR1562533 testis normal 1.34053 SRR535850 larvae hoxb1b mut 1.18319 SRR1562528 eye normal 1.0185899999999999 SRR065197 3 dpf U1C knockout 0.9872920000000001 SRR535851 larvae normal 0.972517 SRR800037 egg normal 0.9603370000000001 SRR1048061 pineal gland dark 0.940731 SRR1562532 spleen normal 0.741901 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.542373 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.392131 SRR1648856 brain normal 0.131652 SRR957180 heart 7 days after heart tip amputation 0.107525 SRR372793 shield normal 0.07084019999999999 SRR372796 bud normal 0.05430650000000001 SRR1648855 brain normal 0.028637299999999997 SRR372800 2 dpf normal 0.02479 SRR372789 1K cell normal 0.00887737