sample tissue condition fpkm SRR1299125 caudal fin Half day time after treatment 6.27061 SRR1299126 caudal fin One day time after treatment 4.61027 SRR891504 liver normal 2.07135 SRR535978 larvae normal 2.0586599999999997 SRR1299124 caudal fin Zero day time after treatment 1.53405 SRR1299127 caudal fin Two days time after treatment 1.46275 SRR516131 skin male and 5 month 1.4562899999999999 SRR886455 128 cell 4-thio-UTP metabolic labeling 1.42744 SRR891510 muscle normal 1.30575 SRR1299128 caudal fin Three days time after treatment 1.13478 SRR516124 skin male and 3.5 year 1.1297 SRR516129 skin male and 5 month 1.12046 SRR633544 larvae exposed to cold stress 1.07284 SRR1299129 caudal fin Seven days time after treatment 1.05083 SRR516128 skin male and 5 month 1.01207 SRR1291417 5 dpi injected marinum 1.00948 SRR535986 larvae nhsl1b mut 0.946733 SRR516122 skin male and 3.5 year 0.942844 SRR748489 egg normal 0.852556 SRR942769 embryo myd88+/+ 0.7803720000000001 SRR594771 endothelium normal 0.767256 SRR519752 7 dpf VD3 treatment 0.7391979999999999 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.724709 ERR023144 brain normal 0.695896 SRR776508 embryo miR-146 knockdown 0.682611 SRR1647683 spleen SVCV treatment 0.679643 SRR514028 retina control morpholino 0.667925 SRR516132 skin male and 5 month 0.640346 SRR942764 embryo myd88-/- 0.634231 SRR527836 24hpf normal 0.632708 SRR519717 2 dpf FETOH treatment 0.62983 SRR516130 skin male and 5 month 0.625995 SRR658537 bud Gata6 morphant 0.60232 SRR1188152 embryo Insulin 0.5 hpi 0.591663 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.582149 SRR519737 2 dpf VD3 treatment 0.571183 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.5595720000000001 SRR1647682 spleen normal 0.549643 SRR1004787 larvae impdh1a morpholino 0.540298 SRR038626 embryo control morpholino and bacterial infection 0.537446 SRR1342216 embryo norml 0.528261 SRR527840 24hpf normal 0.525288 SRR1647680 head kidney SVCV treatment 0.523496 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.510501 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 0.50434 SRR516127 skin male and 5 month 0.503278 SRR700537 heart Gata4 morpholino 0.480484 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.47763599999999995 SRR1569491 embryo normal 0.47188199999999997 SRR1004785 larvae normal 0.462267 SRR1005530 embryo RPL11 morpholino 0.461319 SRR700534 heart control morpholino 0.458686 SRR535913 larvae krox mut 0.45631099999999997 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 0.450938 SRR519742 4 dpf VD3 treatment 0.44621099999999997 SRR519747 6 dpf VD3 treatment 0.443234 SRR1188148 embryo Control PBS 0.5 hpi 0.441542 SRR1562529 intestine and pancreas normal 0.439716 SRR519727 6 dpf FETOH treatment 0.43449899999999997 SRR519732 7 dpf FETOH treatment 0.43374300000000005 SRR1167752 embryo normal 0.42125799999999997 SRR1167762 embryo ptpn6 morpholino 0.420625 SRR1039573 gastrointestinal diet 0.75 NPM 0.397036 SRR535890 larvae normal 0.396419 SRR594769 blood normal 0.393959 SRR519722 4 dpf FETOH treatment 0.383133 SRR1523211 embryo control morpholino 0.381185 SRR1188156 embryo Control PBS 4 hpi 0.376728 SRR658533 bud normal 0.373648 SRR1647681 head kidney SVCV treatment 0.365007 SRR527832 16-36 hpf normal 0.35626199999999997 SRR658539 bud Gata5/6 morphant 0.34700000000000003 SRR726541 5 dpf infection with Mycobacterium marinum 0.342106 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.340956 SRR516126 skin male and 5 month 0.340627 SRR1647679 head kidney normal 0.337304 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.332457 SRR749515 24 hpf eif3ha morphant 0.33014 SRR1647684 spleen SVCV treatment 0.323994 SRR748488 sperm normal 0.32311799999999996 SRR610740 3 dpf normal 0.320682 SRR535926 larvae normal 0.320311 ERR594416 retina transgenic flk1 0.31464200000000003 SRR1708346 embryo SIBPS 0.302675 SRR658541 6 somite normal 0.302162 SRR1188160 embryo Insulin 4 hpi 0.294908 SRR776509 embryo Salmonella infected 0.290871 SRR1167756 embryo mpeg1 morpholino 0.284012 SRR1708344 embryo MUTPS 0.283967 SRR658543 6 somite Gata5 morphan 0.282941 SRR1039571 gastrointestinal diet 0.1 NPM 0.279463 SRR1205154 5dpf transgenic sqET20 0.27833800000000003 SRR1035978 13 hpf rx3-/- 0.26976100000000003 ERR594417 retina normal 0.267119 SRR1342218 embryo marco morpholino 0.26459499999999997 SRR658535 bud Gata5 morphant 0.262984 SRR658545 6 somite Gata6 morphant 0.25856999999999997 SRR038624 embryo traf6 morpholino and bacterial infection 0.254477 SRR514030 retina id2a morpholino 0.24634499999999998 SRR941753 posterior pectoral fin normal 0.244733 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.244471 SRR1021215 sphere stage Mzeomesa 0.241439 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.240155 SRR630464 5 dpf injected epidermidis 0.236483 SRR891495 heart normal 0.236323 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.23585599999999998 SRR1562528 eye normal 0.233657 SRR633516 larvae normal 0.232829 SRR800046 sphere stage 5azaCyD treatment 0.23115700000000003 SRR1562530 liver normal 0.226064 SRR658547 6 somite Gata5/6 morphant 0.22264899999999999 SRR800043 sphere stage normal 0.22259 SRR800045 muscle normal 0.210294 SRR527834 head normal 0.20820100000000002 ERR594418 retina transgenic flk1 and develop tumors 0.20605199999999999 SRR1569495 embryo normal 0.20588 SRR633550 larvae exposed to hypoxia stress 0.204505 SRR749514 24 hpf normal 0.19961099999999998 SRR1021213 sphere stage normal 0.196475 SRR831692 embryo normal 0.196122 SRR630463 5 dpf normal 0.19573800000000002 SRR610741 3 dpf express Ras 0.191663 SRR1005529 embryo control morpholino 0.19164 SRR801554 embryo control morpholino 0.19134500000000002 SRR592700 pineal gland normal 0.188023 SRR1562532 spleen normal 0.182515 SRR776507 embryo normal 0.181919 SRR038627 embryo control morpholino 0.17491800000000002 SRR1167753 embryo bacterial infection 0.173104 SRR1523214 embryo glut12 morpholino 0.17211500000000002 SRR535943 larvae vangl mut 0.168683 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.165935 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.164838 SRR038625 embryo traf6 morpholino 0.16177 SRR1708345 embryo SIBAS 0.157579 SRR748491 germ ring normal 0.15344000000000002 SRR891511 brain normal 0.15248699999999998 SRR1562533 testis normal 0.15048699999999998 SRR516123 skin male and 3.5 year 0.148814 SRR527835 tail normal 0.144482 SRR516125 skin male and 3.5 year 0.14297100000000001 SRR610742 3 dpf express NICD 0.140842 SRR065196 3 dpf normal 0.139997 ERR023146 head kidney normal 0.137285 SRR1035984 13 hpf normal 0.1303 SRR797911 embryo prdm1-/- 0.12767799999999999 SRR941749 anterior pectoral fin normal 0.127647 SRR1004786 larvae control morpholino 0.12673900000000002 SRR535851 larvae normal 0.123642 SRR1534350 larvae 5 ug/l BDE47 treatment 0.107805 SRR726542 5 dpf infection with control 0.10669300000000001 SRR797914 embryo pbx2/4-MO 0.105625 SRR1291414 5 dpi normal 0.101951 SRR1534351 larvae 500 ug/l BDE47 treatment 0.101927 SRR527844 24hpf normal 0.09943389999999999 SRR1035239 liver transgenic mCherry control 0.097426 SRR535848 larvae hoxb1b mut 0.09627519999999999 SRR1028002 head normal 0.0915612 SRR797908 embryo normal 0.0875557 SRR726540 5 dpf normal 0.0874197 SRR592699 pineal gland normal 0.0855425 SRR516121 skin male and 3.5 year 0.0848834 SRR516135 skin male and 5 month 0.0848107 SRR535852 larvae hoxb1b mut 0.083937 SRR592703 pineal gland normal 0.0829826 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.0796 SRR1562531 muscle normal 0.07880060000000001 SRR1104058 heart normal 0.0773878 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.0729573 SRR592702 pineal gland normal 0.0728834 SRR592701 pineal gland normal 0.0670207 SRR1648854 brain normal 0.0664738 SRR1035237 liver transgenic UHRF1 0.0634217 SRR535850 larvae hoxb1b mut 0.0564115 SRR1565811 brain normal 0.052428499999999996 SRR535847 larvae normal 0.0506041 SRR1708343 embryo MUTAS 0.0498635 SRR1004788 larvae impdh1b morpholino 0.040930400000000006 SRR1004789 larvae impdh2 morpholino 0.0378009 SRR1648855 brain normal 0.0314138 SRR1048061 pineal gland dark 0.031116 SRR1565819 brain normal 0.0292613 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.0243827 SRR1648856 brain normal 0.0241477 SRR1565805 brain normal 0.018312000000000002 SRR1565813 brain normal 0.0156896 SRR748490 1 kcell normal 0.0150863 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.014650299999999998 SRR1565815 brain normal 0.0141357 SRR1104059 heart kctd10 mut 0.0132297 SRR1565817 brain normal 0.0127905 SRR1565809 brain normal 0.0112111 SRR372800 2 dpf normal 0.00810597 SRR1621206 embryo normal 0.0034604999999999996