sample tissue condition fpkm SRR1004786 larvae control morpholino 36.3081 SRR527844 24hpf normal 35.958 SRR1708346 embryo SIBPS 32.9654 SRR1708345 embryo SIBAS 32.629 SRR527836 24hpf normal 32.1583 SRR658547 6 somite Gata5/6 morphant 31.9502 SRR535978 larvae normal 31.4884 SRR658539 bud Gata5/6 morphant 29.8237 SRR658545 6 somite Gata6 morphant 29.296 SRR658533 bud normal 28.9544 SRR1569491 embryo normal 28.1253 SRR658541 6 somite normal 27.9126 SRR1004788 larvae impdh1b morpholino 27.5949 SRR658535 bud Gata5 morphant 27.4202 SRR535986 larvae nhsl1b mut 27.4168 SRR527840 24hpf normal 27.1681 SRR658543 6 somite Gata5 morphan 25.7466 SRR1004785 larvae normal 25.7048 SRR797914 embryo pbx2/4-MO 25.2328 ERR023144 brain normal 25.1137 SRR658537 bud Gata6 morphant 24.9981 SRR797917 embryo pbx2/4-MO and prdm1-/- 24.6882 SRR1708344 embryo MUTPS 24.6726 SRR1565819 brain normal 24.203000000000003 SRR797908 embryo normal 23.8834 SRR1565813 brain normal 23.8633 SRR1035981 13 hpf rx3+/+ or rx3+/- 23.7786 SRR797911 embryo prdm1-/- 23.4985 SRR594769 blood normal 23.206999999999997 SRR1565805 brain normal 23.008000000000003 SRR749515 24 hpf eif3ha morphant 22.7908 SRR1565811 brain normal 22.2398 SRR749514 24 hpf normal 22.1671 SRR776507 embryo normal 22.0958 SRR1565807 brain normal 22.0185 SRR1565817 brain normal 21.9251 SRR1035978 13 hpf rx3-/- 21.694000000000003 SRR1565809 brain normal 21.5189 SRR801555 embryo RPS19 morpholino 21.4242 SRR1004787 larvae impdh1a morpholino 21.2431 SRR1708343 embryo MUTAS 21.2111 SRR1565815 brain normal 20.7333 SRR1035984 13 hpf normal 20.3532 SRR594771 endothelium normal 19.6635 SRR514028 retina control morpholino 19.4323 SRR700537 heart Gata4 morpholino 19.136 SRR776508 embryo miR-146 knockdown 18.4793 SRR514030 retina id2a morpholino 18.1316 SRR776509 embryo Salmonella infected 17.7048 ERR594418 retina transgenic flk1 and develop tumors 17.5289 SRR776510 embryo Salmonella infected and miR-146 knockdown 17.3531 SRR1569495 embryo normal 17.1901 SRR1104058 heart normal 17.1069 SRR801556 embryo RPS19 and p53 morpholino 17.0765 SRR535890 larvae normal 17.0078 SRR1004789 larvae impdh2 morpholino 16.2617 SRR1299125 caudal fin Half day time after treatment 16.1067 SRR1005529 embryo control morpholino 15.9756 SRR801554 embryo control morpholino 15.9515 SRR535913 larvae krox mut 15.799000000000001 SRR1005530 embryo RPL11 morpholino 15.6561 SRR1299126 caudal fin One day time after treatment 15.4116 SRR1562533 testis normal 15.2847 SRR535926 larvae normal 15.2076 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 14.7802 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 14.7382 SRR700534 heart control morpholino 14.6901 SRR535943 larvae vangl mut 14.4912 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 14.1501 SRR1104059 heart kctd10 mut 13.8966 SRR1523211 embryo control morpholino 13.8195 SRR1205154 5dpf transgenic sqET20 13.4384 SRR610740 3 dpf normal 13.3925 SRR038627 embryo control morpholino 13.1731 ERR594417 retina normal 13.1354 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 13.1082 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 12.9995 ERR594416 retina transgenic flk1 12.8088 SRR1188152 embryo Insulin 0.5 hpi 12.7532 SRR1299128 caudal fin Three days time after treatment 12.7515 SRR1167752 embryo normal 12.6766 SRR1523214 embryo glut12 morpholino 12.4383 SRR038625 embryo traf6 morpholino 12.4108 SRR527832 16-36 hpf normal 12.1304 SRR516134 skin male and 5 month 11.8348 SRR1035237 liver transgenic UHRF1 11.7286 SRR1188160 embryo Insulin 4 hpi 11.5881 SRR038626 embryo control morpholino and bacterial infection 11.5534 SRR519717 2 dpf FETOH treatment 11.3586 SRR831692 embryo normal 11.2935 SRR038624 embryo traf6 morpholino and bacterial infection 11.253 SRR1299129 caudal fin Seven days time after treatment 11.2312 SRR1167763 embryo ptpn6 morpholino and bacterial infection 11.0381 SRR1188148 embryo Control PBS 0.5 hpi 10.949000000000002 SRR519737 2 dpf VD3 treatment 10.9435 SRR630463 5 dpf normal 10.8723 SRR630464 5 dpf injected epidermidis 10.669 SRR065196 3 dpf normal 10.637 SRR610741 3 dpf express Ras 10.599 SRR1048059 pineal gland light 10.5338 SRR1299127 caudal fin Two days time after treatment 10.4881 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 10.402999999999999 SRR1342216 embryo norml 10.3345 SRR1291414 5 dpi normal 10.2465 SRR1167753 embryo bacterial infection 10.1043 SRR1342217 embryo infection with Mycobacterium marinum 9.91748 SRR516131 skin male and 5 month 9.78652 SRR1342218 embryo marco morpholino 9.68182 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 9.55659 SRR1167762 embryo ptpn6 morpholino 9.51753 SRR065197 3 dpf U1C knockout 9.36395 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 9.06975 SRR1291417 5 dpi injected marinum 8.933530000000001 SRR516126 skin male and 5 month 8.885869999999999 SRR610742 3 dpf express NICD 8.778789999999999 SRR516127 skin male and 5 month 8.774230000000001 SRR535852 larvae hoxb1b mut 8.73011 SRR535851 larvae normal 8.66745 SRR535847 larvae normal 8.666269999999999 SRR942769 embryo myd88+/+ 8.65751 SRR1188156 embryo Control PBS 4 hpi 8.5117 SRR535848 larvae hoxb1b mut 8.44157 SRR1167756 embryo mpeg1 morpholino 8.35099 SRR1167757 embryo mpeg1 morpholino and bacterial infection 8.20004 SRR748491 germ ring normal 8.14976 SRR535850 larvae hoxb1b mut 8.071489999999999 SRR592699 pineal gland normal 7.8856 SRR592698 pineal gland normal 7.876339999999999 SRR1048061 pineal gland dark 7.83453 SRR942764 embryo myd88-/- 7.82137 SRR535849 larvae normal 7.75588 SRR516133 skin male and 5 month 7.74643 SRR891511 brain normal 7.716239999999999 SRR527833 5 dpf normal 7.70591 SRR1562532 spleen normal 7.510739999999999 SRR516130 skin male and 5 month 7.484489999999999 SRR1035239 liver transgenic mCherry control 7.16476 SRR1028003 head normal 6.951410000000001 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 6.889939999999999 SRR1562528 eye normal 6.88087 SRR519742 4 dpf VD3 treatment 6.818810000000001 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 6.67582 SRR519722 4 dpf FETOH treatment 6.665039999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 6.5965 SRR1534349 larvae DMSO vehicle 6.55095 SRR1534350 larvae 5 ug/l BDE47 treatment 6.54972 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 6.54274 SRR592700 pineal gland normal 6.48829 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 6.4667900000000005 SRR633516 larvae normal 6.43365 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 6.40859 SRR516135 skin male and 5 month 6.36064 SRR633550 larvae exposed to hypoxia stress 6.31073 SRR1021215 sphere stage Mzeomesa 6.23228 SRR1647684 spleen SVCV treatment 6.23212 SRR748488 sperm normal 6.2121900000000005 SRR516128 skin male and 5 month 6.17596 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.09531 SRR1021213 sphere stage normal 5.99221 SRR726540 5 dpf normal 5.9427 SRR592702 pineal gland normal 5.8636 SRR516129 skin male and 5 month 5.79614 SRR592703 pineal gland normal 5.79045 SRR1039571 gastrointestinal diet 0.1 NPM 5.7701400000000005 SRR726542 5 dpf infection with control 5.25664 SRR1647680 head kidney SVCV treatment 5.23298 SRR1028004 head normal 5.2256599999999995 SRR1647681 head kidney SVCV treatment 5.17976 SRR592701 pineal gland normal 5.06363 SRR1562529 intestine and pancreas normal 4.974069999999999 ERR023145 heart normal 4.94679 SRR891495 heart normal 4.8721 SRR527834 head normal 4.6477 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4.63227 SRR516132 skin male and 5 month 4.60902 SRR891512 blood normal 4.518 SRR726541 5 dpf infection with Mycobacterium marinum 4.5000800000000005 SRR1028002 head normal 4.38898 SRR1647683 spleen SVCV treatment 4.33664 SRR1299124 caudal fin Zero day time after treatment 4.13159 SRR516124 skin male and 3.5 year 4.125290000000001 SRR519747 6 dpf VD3 treatment 3.9244800000000004 SRR519727 6 dpf FETOH treatment 3.86951 ERR023146 head kidney normal 3.81481 SRR516123 skin male and 3.5 year 3.7645 SRR1039573 gastrointestinal diet 0.75 NPM 3.7606300000000004 SRR516121 skin male and 3.5 year 3.63669 SRR1205160 5dpf transgenic sqET20 and GFP+ 3.47349 SRR800049 sphere stage control treatment 3.46956 SRR516122 skin male and 3.5 year 3.46789 SRR527835 tail normal 3.2815199999999995 SRR1562530 liver normal 3.26201 SRR519752 7 dpf VD3 treatment 2.92993 SRR891510 muscle normal 2.86714 ERR023143 swim bladder normal 2.8381 SRR519732 7 dpf FETOH treatment 2.80211 SRR800043 sphere stage normal 2.73698 SRR941749 anterior pectoral fin normal 2.68237 SRR633544 larvae exposed to cold stress 2.68226 SRR516125 skin male and 3.5 year 2.44837 SRR1647679 head kidney normal 2.39362 SRR1647682 spleen normal 2.24037 SRR800046 sphere stage 5azaCyD treatment 2.19056 SRR1562531 muscle normal 2.11645 SRR941753 posterior pectoral fin normal 1.94773 SRR748490 1 kcell normal 1.71898 SRR800037 egg normal 1.3247200000000001 SRR800045 muscle normal 1.23276 SRR891504 liver normal 1.20404 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.08659 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.817183 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.623215 SRR748489 egg normal 0.556895 SRR1648855 brain normal 0.12485399999999999 SRR957180 heart 7 days after heart tip amputation 0.044067699999999994 SRR1648856 brain normal 0.0130964