sample tissue condition fpkm SRR594771 endothelium normal 13.6595 SRR1621206 embryo normal 10.4759 SRR1035978 13 hpf rx3-/- 9.398660000000001 SRR372798 28 hpf normal 7.9161 SRR1035981 13 hpf rx3+/+ or rx3+/- 7.45971 SRR514030 retina id2a morpholino 7.32302 SRR1569495 embryo normal 7.060389999999999 SRR776510 embryo Salmonella infected and miR-146 knockdown 6.11017 SRR372791 dome normal 5.88376 SRR1049814 256 cell normal 5.21242 SRR514028 retina control morpholino 4.81542 SRR372796 bud normal 4.77626 SRR065196 3 dpf normal 4.6771 SRR535943 larvae vangl mut 4.67316 SRR1104059 heart kctd10 mut 4.60668 SRR372789 1K cell normal 4.5905 SRR658535 bud Gata5 morphant 4.48008 SRR527835 tail normal 4.38628 SRR1005530 embryo RPL11 morpholino 4.37896 SRR1035984 13 hpf normal 4.16028 SRR776508 embryo miR-146 knockdown 3.9883300000000004 SRR527833 5 dpf normal 3.9659800000000005 SRR776509 embryo Salmonella infected 3.94867 SRR886456 256 cell 4-thio-UTP metabolic labeling 3.9138699999999997 SRR1021215 sphere stage Mzeomesa 3.7768 SRR658533 bud normal 3.75545 SRR658539 bud Gata5/6 morphant 3.50302 SRR726540 5 dpf normal 3.4515300000000004 SRR726541 5 dpf infection with Mycobacterium marinum 3.3833900000000003 SRR1104058 heart normal 3.2133700000000003 SRR886455 128 cell 4-thio-UTP metabolic labeling 3.15118 SRR1648854 brain normal 3.1096 SRR372802 5 dpf normal 2.98238 SRR658545 6 somite Gata6 morphant 2.89545 SRR1708343 embryo MUTAS 2.78393 SRR535890 larvae normal 2.68244 SRR749514 24 hpf normal 2.51385 SRR038625 embryo traf6 morpholino 2.29763 SRR1167756 embryo mpeg1 morpholino 2.25323 SRR535849 larvae normal 2.16186 SRR1021213 sphere stage normal 2.01593 SRR1028004 head normal 2.00155 SRR038626 embryo control morpholino and bacterial infection 1.9708299999999999 SRR800037 egg normal 1.9648 SRR065197 3 dpf U1C knockout 1.9364299999999999 SRR1708345 embryo SIBAS 1.9325299999999999 SRR891504 liver normal 1.92782 SRR1048061 pineal gland dark 1.8460299999999998 SRR527836 24hpf normal 1.82313 SRR527844 24hpf normal 1.78751 SRR658541 6 somite normal 1.7820900000000002 SRR1205154 5dpf transgenic sqET20 1.7813 SRR658547 6 somite Gata5/6 morphant 1.72426 SRR527834 head normal 1.7146299999999999 SRR831692 embryo normal 1.67135 SRR372800 2 dpf normal 1.64602 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.6424 SRR535851 larvae normal 1.63608 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.62649 SRR801555 embryo RPS19 morpholino 1.5257399999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.51915 SRR797914 embryo pbx2/4-MO 1.517 SRR1028003 head normal 1.49574 SRR797917 embryo pbx2/4-MO and prdm1-/- 1.48689 SRR535926 larvae normal 1.4137899999999999 SRR749515 24 hpf eif3ha morphant 1.39639 SRR700537 heart Gata4 morpholino 1.27985 SRR1647679 head kidney normal 1.26983 SRR658543 6 somite Gata5 morphan 1.26591 SRR1188152 embryo Insulin 0.5 hpi 1.23961 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.22361 SRR519717 2 dpf FETOH treatment 1.1770100000000001 ERR023146 head kidney normal 1.1697799999999998 SRR776507 embryo normal 1.15662 ERR594418 retina transgenic flk1 and develop tumors 1.1202299999999998 SRR519742 4 dpf VD3 treatment 1.0862399999999999 SRR748488 sperm normal 1.08592 SRR1004788 larvae impdh1b morpholino 1.0516299999999998 SRR1565805 brain normal 1.0122200000000001 SRR1004786 larvae control morpholino 1.0104600000000001 SRR1291417 5 dpi injected marinum 0.9956010000000001 SRR519747 6 dpf VD3 treatment 0.986085 SRR535847 larvae normal 0.982274 SRR1188156 embryo Control PBS 4 hpi 0.949199 SRR658537 bud Gata6 morphant 0.9177280000000001 SRR535850 larvae hoxb1b mut 0.9009870000000001 SRR1035239 liver transgenic mCherry control 0.8919950000000001 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.8861620000000001 SRR1565809 brain normal 0.8842909999999999 SRR527832 16-36 hpf normal 0.80587 SRR797908 embryo normal 0.800617 SRR1048059 pineal gland light 0.786719 SRR748490 1 kcell normal 0.7858569999999999 SRR1565815 brain normal 0.778722 SRR633544 larvae exposed to cold stress 0.732692 SRR633516 larvae normal 0.719474 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.718186 SRR592703 pineal gland normal 0.702226 SRR1565817 brain normal 0.6875979999999999 SRR372793 shield normal 0.685538 SRR519752 7 dpf VD3 treatment 0.681984 SRR630464 5 dpf injected epidermidis 0.681958 SRR519727 6 dpf FETOH treatment 0.664734 SRR1004785 larvae normal 0.646226 SRR797911 embryo prdm1-/- 0.638417 SRR630463 5 dpf normal 0.579896 SRR592701 pineal gland normal 0.5650350000000001 SRR1565819 brain normal 0.559032 SRR519722 4 dpf FETOH treatment 0.5562520000000001 SRR1167762 embryo ptpn6 morpholino 0.524352 SRR1291414 5 dpi normal 0.520648 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.49840500000000004 SRR527840 24hpf normal 0.49194899999999997 ERR594416 retina transgenic flk1 0.48094499999999996 ERR023144 brain normal 0.46863299999999997 SRR038624 embryo traf6 morpholino and bacterial infection 0.46795 SRR1004789 larvae impdh2 morpholino 0.44288900000000003 SRR372787 2-4 cell normal 0.422696 SRR519737 2 dpf VD3 treatment 0.417784 SRR1167753 embryo bacterial infection 0.38043899999999997 SRR1167752 embryo normal 0.37405 SRR1299129 caudal fin Seven days time after treatment 0.347717 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.326087 SRR1562529 intestine and pancreas normal 0.316432 SRR1523211 embryo control morpholino 0.310632 ERR594417 retina normal 0.28429 SRR1299124 caudal fin Zero day time after treatment 0.27081700000000003 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.243154 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.234237 SRR610741 3 dpf express Ras 0.232021 SRR941749 anterior pectoral fin normal 0.227156 SRR1299128 caudal fin Three days time after treatment 0.215471 SRR1565807 brain normal 0.187591 SRR1342218 embryo marco morpholino 0.181306 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.156099 SRR1188148 embryo Control PBS 0.5 hpi 0.14409 SRR1534350 larvae 5 ug/l BDE47 treatment 0.123902 SRR1004787 larvae impdh1a morpholino 0.12133699999999999 SRR941753 posterior pectoral fin normal 0.121304 SRR800043 sphere stage normal 0.119958 SRR633550 larvae exposed to hypoxia stress 0.119301 SRR1708344 embryo MUTPS 0.106136 SRR1565811 brain normal 0.103896 SRR594769 blood normal 0.0932865 SRR519732 7 dpf FETOH treatment 0.0839784 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.0783087 SRR700534 heart control morpholino 0.0779306 SRR1188160 embryo Insulin 4 hpi 0.07275269999999999 SRR1342216 embryo norml 0.06577419999999999 SRR1647681 head kidney SVCV treatment 0.0524477 SRR1565813 brain normal 0.029361500000000002 SRR535913 larvae krox mut 0.022917700000000003 SRR038627 embryo control morpholino 0.00507883 SRR1523214 embryo glut12 morpholino 0.00416578 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.00380287 SRR1342217 embryo infection with Mycobacterium marinum 0.00211253 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.000641008 SRR1708346 embryo SIBPS 0.000438611 SRR1035237 liver transgenic UHRF1 0.000133185