sample tissue condition fpkm ERR023146 head kidney normal 128.326 ERR023143 swim bladder normal 71.2143 ERR023145 heart normal 51.9968 SRR514028 retina control morpholino 40.9539 SRR1562530 liver normal 38.4589 ERR023144 brain normal 31.869 SRR594771 endothelium normal 23.1847 SRR514030 retina id2a morpholino 22.2427 SRR594769 blood normal 21.8536 SRR891504 liver normal 18.445 SRR1205160 5dpf transgenic sqET20 and GFP+ 17.5969 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 15.0204 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 14.4625 SRR776507 embryo normal 14.1818 SRR1299124 caudal fin Zero day time after treatment 13.8929 SRR700534 heart control morpholino 13.7285 SRR776508 embryo miR-146 knockdown 13.282 SRR1167752 embryo normal 12.74 SRR1167756 embryo mpeg1 morpholino 12.5469 SRR1299125 caudal fin Half day time after treatment 12.2378 SRR1167757 embryo mpeg1 morpholino and bacterial infection 12.0425 SRR1708345 embryo SIBAS 11.7027 SRR1299129 caudal fin Seven days time after treatment 10.776 SRR1104058 heart normal 10.7261 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 10.6475 SRR700537 heart Gata4 morpholino 10.5149 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 10.4737 SRR1167753 embryo bacterial infection 10.4594 SRR1035237 liver transgenic UHRF1 10.4472 SRR630464 5 dpf injected epidermidis 10.3363 SRR1299126 caudal fin One day time after treatment 10.2887 SRR527836 24hpf normal 10.2878 SRR776509 embryo Salmonella infected 10.2802 SRR1708346 embryo SIBPS 10.1288 SRR776510 embryo Salmonella infected and miR-146 knockdown 10.0249 SRR1342218 embryo marco morpholino 9.97875 SRR1299127 caudal fin Two days time after treatment 9.87853 SRR630463 5 dpf normal 9.74433 SRR942769 embryo myd88+/+ 9.6968 SRR1342216 embryo norml 9.64371 SRR1035239 liver transgenic mCherry control 9.59334 SRR1167763 embryo ptpn6 morpholino and bacterial infection 9.55845 SRR1562532 spleen normal 9.5536 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 9.151769999999999 SRR516133 skin male and 5 month 9.06691 SRR942764 embryo myd88-/- 8.92048 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 8.88524 SRR535978 larvae normal 8.76158 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 8.482460000000001 SRR1565807 brain normal 8.36785 SRR1565811 brain normal 8.35591 SRR1205154 5dpf transgenic sqET20 8.33325 SRR527840 24hpf normal 8.28452 SRR1708344 embryo MUTPS 8.15662 SRR535986 larvae nhsl1b mut 8.07258 SRR1565805 brain normal 8.06365 SRR1104059 heart kctd10 mut 7.99299 SRR749514 24 hpf normal 7.8852 SRR1167762 embryo ptpn6 morpholino 7.65561 SRR1291414 5 dpi normal 7.5340300000000004 SRR1565817 brain normal 7.47646 SRR749515 24 hpf eif3ha morphant 7.4728 SRR1565809 brain normal 7.44954 SRR1299128 caudal fin Three days time after treatment 7.3898399999999995 SRR1565813 brain normal 7.3273600000000005 SRR1342217 embryo infection with Mycobacterium marinum 7.3086 SRR1565819 brain normal 7.2561100000000005 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 7.20936 SRR1523211 embryo control morpholino 7.02835 SRR1647683 spleen SVCV treatment 6.90068 SRR1565815 brain normal 6.8804300000000005 SRR1708343 embryo MUTAS 6.866689999999999 SRR1523214 embryo glut12 morpholino 6.79617 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6.7416100000000005 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 6.4511400000000005 SRR1039571 gastrointestinal diet 0.1 NPM 6.36762 SRR527833 5 dpf normal 6.35211 SRR1291417 5 dpi injected marinum 6.20821 SRR1647682 spleen normal 6.11019 SRR1647684 spleen SVCV treatment 6.10524 SRR1028004 head normal 6.0711699999999995 SRR610741 3 dpf express Ras 6.06274 SRR592702 pineal gland normal 5.95925 SRR1188152 embryo Insulin 0.5 hpi 5.89797 SRR592699 pineal gland normal 5.878480000000001 SRR1028002 head normal 5.85325 SRR1562528 eye normal 5.72889 SRR516131 skin male and 5 month 5.6731 SRR527844 24hpf normal 5.60754 SRR831692 embryo normal 5.4963 SRR592703 pineal gland normal 5.47004 SRR610740 3 dpf normal 5.46759 SRR1188148 embryo Control PBS 0.5 hpi 5.354509999999999 SRR516125 skin male and 3.5 year 5.33462 SRR535943 larvae vangl mut 5.3183 SRR1188156 embryo Control PBS 4 hpi 5.29138 SRR658547 6 somite Gata5/6 morphant 5.18082 SRR065196 3 dpf normal 5.180680000000001 SRR535926 larvae normal 5.11395 SRR592698 pineal gland normal 5.09366 SRR527834 head normal 5.081 SRR886457 512 cell 4-thio-UTP metabolic labeling 5.018730000000001 SRR610742 3 dpf express NICD 5.0139 SRR658541 6 somite normal 4.99576 ERR594417 retina normal 4.7678 SRR658543 6 somite Gata5 morphan 4.75605 SRR519717 2 dpf FETOH treatment 4.72078 SRR516127 skin male and 5 month 4.70549 SRR658545 6 somite Gata6 morphant 4.67011 SRR519737 2 dpf VD3 treatment 4.62184 SRR535913 larvae krox mut 4.57231 SRR592700 pineal gland normal 4.55586 SRR1534350 larvae 5 ug/l BDE47 treatment 4.54919 SRR1188160 embryo Insulin 4 hpi 4.51273 SRR941749 anterior pectoral fin normal 4.49491 SRR535890 larvae normal 4.2778599999999996 SRR1534351 larvae 500 ug/l BDE47 treatment 4.24566 SRR797914 embryo pbx2/4-MO 4.224559999999999 SRR1004786 larvae control morpholino 4.2070300000000005 SRR516126 skin male and 5 month 4.2001 SRR633550 larvae exposed to hypoxia stress 4.19503 SRR1562529 intestine and pancreas normal 4.09184 SRR797911 embryo prdm1-/- 4.06599 SRR535847 larvae normal 4.04752 SRR065197 3 dpf U1C knockout 3.9801 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.88197 SRR886455 128 cell 4-thio-UTP metabolic labeling 3.8760800000000004 SRR519722 4 dpf FETOH treatment 3.8593300000000004 SRR891511 brain normal 3.8500900000000002 SRR1569491 embryo normal 3.82196 SRR1569495 embryo normal 3.79486 SRR038627 embryo control morpholino 3.7929199999999996 SRR726540 5 dpf normal 3.78893 SRR658535 bud Gata5 morphant 3.76404 SRR1048059 pineal gland light 3.7516199999999995 ERR594418 retina transgenic flk1 and develop tumors 3.7325699999999995 SRR1647680 head kidney SVCV treatment 3.7292 SRR516128 skin male and 5 month 3.72689 SRR516129 skin male and 5 month 3.71956 SRR748489 egg normal 3.71785 SRR516121 skin male and 3.5 year 3.70994 SRR633516 larvae normal 3.6872 SRR519742 4 dpf VD3 treatment 3.68229 SRR516130 skin male and 5 month 3.6816 SRR592701 pineal gland normal 3.676 SRR1005529 embryo control morpholino 3.6753 SRR801554 embryo control morpholino 3.6695599999999997 SRR527832 16-36 hpf normal 3.66561 SRR535848 larvae hoxb1b mut 3.6462199999999996 SRR516134 skin male and 5 month 3.63026 SRR797908 embryo normal 3.62384 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 3.6193699999999995 SRR1028003 head normal 3.5776199999999996 SRR535850 larvae hoxb1b mut 3.54463 SRR535852 larvae hoxb1b mut 3.52863 SRR658533 bud normal 3.4561900000000003 SRR535851 larvae normal 3.40237 SRR535849 larvae normal 3.3923400000000004 SRR1562533 testis normal 3.3914400000000002 SRR519747 6 dpf VD3 treatment 3.34796 ERR594416 retina transgenic flk1 3.2777800000000004 SRR519727 6 dpf FETOH treatment 3.17712 SRR038625 embryo traf6 morpholino 3.14721 SRR658539 bud Gata5/6 morphant 3.10023 SRR1004788 larvae impdh1b morpholino 3.0723 SRR1534349 larvae DMSO vehicle 3.0478099999999997 SRR1048061 pineal gland dark 3.00042 SRR1039573 gastrointestinal diet 0.75 NPM 2.8686 SRR1004785 larvae normal 2.8643 SRR516123 skin male and 3.5 year 2.82363 SRR1647681 head kidney SVCV treatment 2.8088599999999997 SRR1035981 13 hpf rx3+/+ or rx3+/- 2.79936 SRR726542 5 dpf infection with control 2.77927 SRR516132 skin male and 5 month 2.75468 SRR1647679 head kidney normal 2.74112 SRR519752 7 dpf VD3 treatment 2.7208 SRR1035978 13 hpf rx3-/- 2.70507 SRR891495 heart normal 2.6386 SRR800043 sphere stage normal 2.6354599999999997 SRR519732 7 dpf FETOH treatment 2.62545 SRR038626 embryo control morpholino and bacterial infection 2.62422 SRR1562531 muscle normal 2.5120299999999998 SRR516122 skin male and 3.5 year 2.50996 SRR658537 bud Gata6 morphant 2.4209099999999997 SRR038624 embryo traf6 morpholino and bacterial infection 2.41522 SRR726541 5 dpf infection with Mycobacterium marinum 2.38111 SRR1035984 13 hpf normal 2.28515 SRR941753 posterior pectoral fin normal 2.2505 SRR527835 tail normal 2.17289 SRR633544 larvae exposed to cold stress 2.16878 SRR516135 skin male and 5 month 2.15688 SRR1005530 embryo RPL11 morpholino 2.15148 SRR516124 skin male and 3.5 year 2.03249 SRR800037 egg normal 2.01162 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.9243400000000002 SRR800049 sphere stage control treatment 1.8414599999999999 SRR801556 embryo RPS19 and p53 morpholino 1.76911 SRR891510 muscle normal 1.71892 SRR748490 1 kcell normal 1.6730900000000002 SRR1004787 larvae impdh1a morpholino 1.63291 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 1.59649 SRR800045 muscle normal 1.58709 SRR800046 sphere stage 5azaCyD treatment 1.55449 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.54682 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 1.40171 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 1.35659 SRR801555 embryo RPS19 morpholino 1.26546 SRR1004789 larvae impdh2 morpholino 1.16595 SRR748488 sperm normal 0.981959 SRR891512 blood normal 0.8645940000000001 SRR1021213 sphere stage normal 0.7347670000000001 SRR1021215 sphere stage Mzeomesa 0.6018140000000001 SRR748491 germ ring normal 0.384135 SRR957181 heart normal 0.00806021 SRR957180 heart 7 days after heart tip amputation 0.00707786 SRR372791 dome normal 0.00688275 SRR1648854 brain normal 0.00454789 SRR1648856 brain normal 0.0041508000000000005