sample tissue condition fpkm SRR594771 endothelium normal 31.7412 ERR023144 brain normal 31.4422 SRR594769 blood normal 26.0931 SRR1647682 spleen normal 24.8132 SRR797917 embryo pbx2/4-MO and prdm1-/- 20.8948 SRR658533 bud normal 20.6866 SRR658539 bud Gata5/6 morphant 20.0504 SRR941753 posterior pectoral fin normal 18.9855 SRR941749 anterior pectoral fin normal 18.7621 SRR1647684 spleen SVCV treatment 18.105999999999998 SRR1188152 embryo Insulin 0.5 hpi 17.7901 SRR1205154 5dpf transgenic sqET20 17.6786 SRR1647683 spleen SVCV treatment 17.4443 SRR658537 bud Gata6 morphant 16.991 SRR658547 6 somite Gata5/6 morphant 16.9874 SRR797914 embryo pbx2/4-MO 16.9795 ERR594417 retina normal 16.5722 SRR797911 embryo prdm1-/- 16.2922 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 16.1273 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 16.1082 SRR658541 6 somite normal 15.8287 SRR1291417 5 dpi injected marinum 15.7932 SRR700534 heart control morpholino 15.6975 SRR1188160 embryo Insulin 4 hpi 15.5179 SRR700537 heart Gata4 morpholino 15.2906 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 15.2276 SRR658535 bud Gata5 morphant 15.0647 SRR797908 embryo normal 14.7865 SRR658543 6 somite Gata5 morphan 14.5839 SRR658545 6 somite Gata6 morphant 14.4898 SRR1188156 embryo Control PBS 4 hpi 14.3749 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 13.964 SRR592700 pineal gland normal 13.8576 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.7182 SRR630464 5 dpf injected epidermidis 13.6111 SRR1647680 head kidney SVCV treatment 13.2896 SRR1205160 5dpf transgenic sqET20 and GFP+ 13.2568 SRR630463 5 dpf normal 13.1175 ERR594416 retina transgenic flk1 12.9093 SRR516124 skin male and 3.5 year 12.8681 SRR1647679 head kidney normal 12.7115 SRR516122 skin male and 3.5 year 12.5824 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 12.3517 SRR776507 embryo normal 12.0479 SRR592703 pineal gland normal 11.9405 SRR535913 larvae krox mut 11.815999999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 11.8138 SRR749515 24 hpf eif3ha morphant 11.805 SRR749514 24 hpf normal 11.7487 SRR1342218 embryo marco morpholino 11.7169 SRR527834 head normal 11.7053 SRR592702 pineal gland normal 11.4805 SRR1048059 pineal gland light 11.4731 SRR516129 skin male and 5 month 11.1979 SRR1523214 embryo glut12 morpholino 11.1862 SRR1647681 head kidney SVCV treatment 10.6503 SRR1004788 larvae impdh1b morpholino 10.635 SRR1562528 eye normal 10.5748 SRR516127 skin male and 5 month 10.5184 SRR1188148 embryo Control PBS 0.5 hpi 10.3771 SRR1562532 spleen normal 10.1062 SRR516125 skin male and 3.5 year 10.0989 SRR1562533 testis normal 10.0046 SRR065196 3 dpf normal 9.91485 SRR535986 larvae nhsl1b mut 9.82473 SRR610742 3 dpf express NICD 9.78333 SRR1167752 embryo normal 9.77709 SRR1523211 embryo control morpholino 9.67709 SRR516123 skin male and 3.5 year 9.374310000000001 SRR1562531 muscle normal 9.25623 SRR726540 5 dpf normal 9.12758 SRR592699 pineal gland normal 8.8868 SRR1291414 5 dpi normal 8.69476 SRR1648855 brain normal 8.6789 SRR1299129 caudal fin Seven days time after treatment 8.64339 SRR038626 embryo control morpholino and bacterial infection 8.58227 SRR610741 3 dpf express Ras 8.57431 SRR535890 larvae normal 8.55515 SRR1035981 13 hpf rx3+/+ or rx3+/- 8.4816 SRR592701 pineal gland normal 8.4358 SRR527832 16-36 hpf normal 8.40135 SRR535926 larvae normal 8.3729 SRR516134 skin male and 5 month 8.3526 SRR1167757 embryo mpeg1 morpholino and bacterial infection 8.25437 SRR1562530 liver normal 8.2092 SRR726541 5 dpf infection with Mycobacterium marinum 8.17555 SRR038627 embryo control morpholino 8.12063 SRR535943 larvae vangl mut 8.03706 SRR1342216 embryo norml 8.015139999999999 SRR1104058 heart normal 7.991680000000001 SRR776508 embryo miR-146 knockdown 7.9405600000000005 SRR1004789 larvae impdh2 morpholino 7.90077 SRR038625 embryo traf6 morpholino 7.88595 SRR535849 larvae normal 7.80023 SRR527844 24hpf normal 7.6634199999999995 SRR516121 skin male and 3.5 year 7.572939999999999 SRR592698 pineal gland normal 7.55559 SRR1048061 pineal gland dark 7.53097 SRR942769 embryo myd88+/+ 7.5293 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 7.4599899999999995 SRR1299124 caudal fin Zero day time after treatment 7.441330000000001 SRR726542 5 dpf infection with control 7.34505 SRR535852 larvae hoxb1b mut 7.31832 SRR1035978 13 hpf rx3-/- 7.1808 SRR1569495 embryo normal 7.05775 SRR1004786 larvae control morpholino 7.03735 SRR891511 brain normal 7.00188 SRR1342217 embryo infection with Mycobacterium marinum 6.9245 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 6.750369999999999 SRR1562529 intestine and pancreas normal 6.69497 ERR594418 retina transgenic flk1 and develop tumors 6.65136 SRR1167753 embryo bacterial infection 6.52073 SRR516135 skin male and 5 month 6.42139 SRR831692 embryo normal 6.19795 SRR535847 larvae normal 6.18271 SRR527836 24hpf normal 6.15875 SRR535848 larvae hoxb1b mut 6.14872 SRR535851 larvae normal 6.1284 SRR1028003 head normal 6.08016 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 6.02671 SRR610740 3 dpf normal 5.98577 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 5.90977 SRR527833 5 dpf normal 5.87807 SRR1167756 embryo mpeg1 morpholino 5.80756 SRR1035984 13 hpf normal 5.7788699999999995 SRR1028002 head normal 5.7462 ERR023145 heart normal 5.74259 SRR942764 embryo myd88-/- 5.73952 SRR633550 larvae exposed to hypoxia stress 5.7171 SRR1569491 embryo normal 5.5727199999999995 SRR065197 3 dpf U1C knockout 5.56936 SRR516130 skin male and 5 month 5.49219 SRR633516 larvae normal 5.48307 SRR516128 skin male and 5 month 5.37386 SRR038624 embryo traf6 morpholino and bacterial infection 5.23497 SRR516133 skin male and 5 month 5.18243 SRR519717 2 dpf FETOH treatment 5.1639 SRR535850 larvae hoxb1b mut 4.96901 SRR1534351 larvae 500 ug/l BDE47 treatment 4.909619999999999 SRR514028 retina control morpholino 4.7176800000000005 SRR1028004 head normal 4.68726 SRR1035237 liver transgenic UHRF1 4.6610000000000005 SRR1534349 larvae DMSO vehicle 4.59192 SRR516126 skin male and 5 month 4.54447 SRR1534350 larvae 5 ug/l BDE47 treatment 4.47759 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.43691 SRR516131 skin male and 5 month 4.2857 SRR1104059 heart kctd10 mut 4.26004 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.18807 SRR1039573 gastrointestinal diet 0.75 NPM 4.17645 SRR516132 skin male and 5 month 4.1264199999999995 SRR519737 2 dpf VD3 treatment 4.02174 SRR514030 retina id2a morpholino 3.9851099999999997 SRR372800 2 dpf normal 3.77107 SRR372798 28 hpf normal 3.7404800000000002 SRR1167762 embryo ptpn6 morpholino 3.7257599999999997 SRR1565809 brain normal 3.6506800000000004 SRR372802 5 dpf normal 3.6219 SRR748491 germ ring normal 3.5405699999999998 SRR1299125 caudal fin Half day time after treatment 3.5291 SRR535978 larvae normal 3.47696 SRR1565811 brain normal 3.39402 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.3440800000000004 SRR1708343 embryo MUTAS 3.3063599999999997 SRR1035239 liver transgenic mCherry control 3.25573 SRR1565819 brain normal 3.23477 ERR023143 swim bladder normal 3.18669 SRR519747 6 dpf VD3 treatment 3.11225 SRR1565817 brain normal 3.09764 SRR519742 4 dpf VD3 treatment 2.99017 SRR519752 7 dpf VD3 treatment 2.9445900000000003 SRR519732 7 dpf FETOH treatment 2.91856 SRR801556 embryo RPS19 and p53 morpholino 2.9101 SRR1005530 embryo RPL11 morpholino 2.84483 SRR372793 shield normal 2.8206 SRR891495 heart normal 2.76622 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.73847 SRR957181 heart normal 2.73504 SRR1021215 sphere stage Mzeomesa 2.69524 SRR1565805 brain normal 2.62961 SRR1004785 larvae normal 2.56914 SRR633544 larvae exposed to cold stress 2.5491900000000003 SRR519727 6 dpf FETOH treatment 2.5194900000000002 SRR1299126 caudal fin One day time after treatment 2.51884 SRR527835 tail normal 2.5105 SRR1299127 caudal fin Two days time after treatment 2.48385 SRR372796 bud normal 2.4386400000000004 SRR1565815 brain normal 2.33935 SRR1004787 larvae impdh1a morpholino 2.3327400000000003 SRR957180 heart 7 days after heart tip amputation 2.27025 SRR776509 embryo Salmonella infected 2.23212 SRR519722 4 dpf FETOH treatment 2.22853 SRR527840 24hpf normal 1.97815 SRR801555 embryo RPS19 morpholino 1.9252099999999999 SRR1565807 brain normal 1.9156400000000002 SRR372791 dome normal 1.7651 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.7209400000000001 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.63596 SRR1021213 sphere stage normal 1.5564200000000001 SRR1648854 brain normal 1.54403 SRR891512 blood normal 1.33779 ERR023146 head kidney normal 1.32491 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.32158 SRR800045 muscle normal 1.3028 SRR1648856 brain normal 1.19238 SRR1565813 brain normal 1.13944 SRR800046 sphere stage 5azaCyD treatment 1.0939 SRR748488 sperm normal 0.9748600000000001 SRR801554 embryo control morpholino 0.820672 SRR1005529 embryo control morpholino 0.820536 SRR1708344 embryo MUTPS 0.800071 SRR800049 sphere stage control treatment 0.601426 SRR1708345 embryo SIBAS 0.5889800000000001 SRR1708346 embryo SIBPS 0.5370560000000001 SRR800043 sphere stage normal 0.502953 SRR1039571 gastrointestinal diet 0.1 NPM 0.38295 SRR1299128 caudal fin Three days time after treatment 0.12263399999999999 SRR372787 2-4 cell normal 0.114048 SRR1621206 embryo normal 0.020291 SRR891510 muscle normal 0.00285788