sample tissue condition fpkm SRR748489 egg normal 27.1894 SRR886455 128 cell 4-thio-UTP metabolic labeling 25.413 SRR886457 512 cell 4-thio-UTP metabolic labeling 22.8027 SRR886456 256 cell 4-thio-UTP metabolic labeling 22.1461 SRR1569491 embryo normal 21.3396 SRR594771 endothelium normal 20.175 SRR1569495 embryo normal 17.449 SRR514028 retina control morpholino 16.0285 SRR514030 retina id2a morpholino 12.8698 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 11.9079 SRR1021213 sphere stage normal 11.796 SRR1205154 5dpf transgenic sqET20 10.9354 SRR516122 skin male and 3.5 year 10.8663 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 10.8253 SRR516123 skin male and 3.5 year 10.6904 SRR748490 1 kcell normal 10.6329 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 10.4751 SRR516133 skin male and 5 month 10.3205 SRR630464 5 dpf injected epidermidis 10.0166 SRR1188148 embryo Control PBS 0.5 hpi 9.82755 ERR023144 brain normal 9.77902 SRR630463 5 dpf normal 9.77789 SRR516129 skin male and 5 month 9.76373 SRR1291417 5 dpi injected marinum 9.74095 ERR023143 swim bladder normal 9.73325 SRR1167763 embryo ptpn6 morpholino and bacterial infection 9.72437 SRR594769 blood normal 9.58965 SRR1708345 embryo SIBAS 9.56783 SRR776509 embryo Salmonella infected 9.543660000000001 SRR776507 embryo normal 9.50123 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.445210000000001 SRR516127 skin male and 5 month 9.4263 SRR516128 skin male and 5 month 9.4089 SRR942769 embryo myd88+/+ 9.37688 SRR516125 skin male and 3.5 year 9.198 ERR594417 retina normal 9.191880000000001 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 9.18341 SRR1708346 embryo SIBPS 9.16412 SRR776508 embryo miR-146 knockdown 9.10486 SRR516126 skin male and 5 month 9.10218 SRR1167753 embryo bacterial infection 9.07518 SRR1104058 heart normal 9.0241 SRR535978 larvae normal 8.98883 SRR1167752 embryo normal 8.88837 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 8.86533 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 8.865260000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 8.85322 SRR516124 skin male and 3.5 year 8.81504 SRR1299127 caudal fin Two days time after treatment 8.72039 SRR1523214 embryo glut12 morpholino 8.64165 SRR942764 embryo myd88-/- 8.61439 SRR516121 skin male and 3.5 year 8.61202 SRR516132 skin male and 5 month 8.60244 SRR1299125 caudal fin Half day time after treatment 8.57364 SRR1342216 embryo norml 8.500919999999999 SRR592699 pineal gland normal 8.48355 SRR592698 pineal gland normal 8.43495 SRR519717 2 dpf FETOH treatment 8.29705 SRR592700 pineal gland normal 8.24173 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.22993 SRR1299126 caudal fin One day time after treatment 8.20058 SRR1523211 embryo control morpholino 8.18802 SRR519737 2 dpf VD3 treatment 8.04107 SRR1004788 larvae impdh1b morpholino 7.96017 SRR535986 larvae nhsl1b mut 7.953939999999999 SRR516130 skin male and 5 month 7.89047 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 7.7973 SRR1342218 embryo marco morpholino 7.793189999999999 SRR1167757 embryo mpeg1 morpholino and bacterial infection 7.722239999999999 SRR700537 heart Gata4 morpholino 7.71125 SRR797914 embryo pbx2/4-MO 7.70288 SRR527836 24hpf normal 7.68584 SRR1299128 caudal fin Three days time after treatment 7.67587 SRR516135 skin male and 5 month 7.651339999999999 SRR797911 embryo prdm1-/- 7.6242600000000005 SRR1188152 embryo Insulin 0.5 hpi 7.5919 SRR797917 embryo pbx2/4-MO and prdm1-/- 7.5234 SRR592702 pineal gland normal 7.466639999999999 SRR1291414 5 dpi normal 7.43807 SRR1299129 caudal fin Seven days time after treatment 7.37775 SRR592703 pineal gland normal 7.330369999999999 SRR1299124 caudal fin Zero day time after treatment 7.32274 SRR1104059 heart kctd10 mut 7.31647 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 7.304139999999999 SRR1708343 embryo MUTAS 7.303660000000001 SRR065196 3 dpf normal 7.22375 SRR797908 embryo normal 7.223210000000001 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 7.20327 SRR527844 24hpf normal 7.17847 SRR1021215 sphere stage Mzeomesa 7.1452 SRR658543 6 somite Gata5 morphan 7.1325199999999995 SRR516134 skin male and 5 month 7.13139 SRR1562531 muscle normal 7.09956 SRR658547 6 somite Gata5/6 morphant 7.07769 SRR658539 bud Gata5/6 morphant 7.00913 SRR527835 tail normal 7.004980000000001 ERR594416 retina transgenic flk1 6.97881 SRR1048061 pineal gland dark 6.956589999999999 SRR038627 embryo control morpholino 6.94544 SRR658545 6 somite Gata6 morphant 6.94101 SRR519752 7 dpf VD3 treatment 6.8944 SRR1562533 testis normal 6.88788 SRR535890 larvae normal 6.85025 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 6.84485 SRR1167762 embryo ptpn6 morpholino 6.80911 SRR1562528 eye normal 6.794989999999999 SRR592701 pineal gland normal 6.7640199999999995 SRR1004785 larvae normal 6.757910000000001 SRR1188156 embryo Control PBS 4 hpi 6.711710000000001 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 6.70481 SRR749514 24 hpf normal 6.70074 SRR519747 6 dpf VD3 treatment 6.64244 SRR1188160 embryo Insulin 4 hpi 6.59935 SRR516131 skin male and 5 month 6.572080000000001 SRR535943 larvae vangl mut 6.537999999999999 SRR748488 sperm normal 6.53187 SRR535913 larvae krox mut 6.52996 SRR519732 7 dpf FETOH treatment 6.51815 SRR1005529 embryo control morpholino 6.50954 SRR1048059 pineal gland light 6.5031 SRR801554 embryo control morpholino 6.4996599999999995 SRR527840 24hpf normal 6.49145 SRR519727 6 dpf FETOH treatment 6.46965 SRR700534 heart control morpholino 6.43884 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 6.435919999999999 SRR519722 4 dpf FETOH treatment 6.43004 SRR658541 6 somite normal 6.40512 SRR831692 embryo normal 6.39698 SRR658535 bud Gata5 morphant 6.3733 SRR535926 larvae normal 6.35807 SRR1167756 embryo mpeg1 morpholino 6.32529 SRR749515 24 hpf eif3ha morphant 6.240469999999999 SRR1004787 larvae impdh1a morpholino 6.22037 SRR038624 embryo traf6 morpholino and bacterial infection 6.19897 ERR594418 retina transgenic flk1 and develop tumors 6.11952 SRR726540 5 dpf normal 6.09055 SRR1565811 brain normal 6.00471 SRR658533 bud normal 5.997000000000001 SRR519742 4 dpf VD3 treatment 5.98195 SRR1647683 spleen SVCV treatment 5.9325 SRR1004786 larvae control morpholino 5.89826 SRR1708344 embryo MUTPS 5.88311 SRR038625 embryo traf6 morpholino 5.87092 SRR610742 3 dpf express NICD 5.86495 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 5.78677 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 5.7811699999999995 ERR023145 heart normal 5.73373 SRR1562532 spleen normal 5.70149 SRR1647682 spleen normal 5.65768 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.60428 SRR1342217 embryo infection with Mycobacterium marinum 5.57275 SRR038626 embryo control morpholino and bacterial infection 5.56166 SRR633550 larvae exposed to hypoxia stress 5.4718599999999995 SRR726542 5 dpf infection with control 5.3807 SRR535848 larvae hoxb1b mut 5.37973 SRR1565819 brain normal 5.338830000000001 SRR065197 3 dpf U1C knockout 5.31746 SRR1565809 brain normal 5.28102 SRR800043 sphere stage normal 5.277019999999999 SRR1565805 brain normal 5.21218 SRR658537 bud Gata6 morphant 5.18745 SRR1565817 brain normal 5.12858 SRR1565807 brain normal 5.11269 ERR023146 head kidney normal 5.10342 SRR535852 larvae hoxb1b mut 5.09029 SRR1565815 brain normal 5.04571 SRR610740 3 dpf normal 5.004230000000001 SRR1035978 13 hpf rx3-/- 4.92605 SRR1565813 brain normal 4.9092199999999995 SRR941749 anterior pectoral fin normal 4.87165 SRR535847 larvae normal 4.86413 SRR633516 larvae normal 4.85412 SRR535849 larvae normal 4.8279 SRR527832 16-36 hpf normal 4.82664 SRR1647684 spleen SVCV treatment 4.78615 SRR891495 heart normal 4.7533900000000004 SRR535851 larvae normal 4.65822 SRR801556 embryo RPS19 and p53 morpholino 4.58671 SRR633544 larvae exposed to cold stress 4.5555699999999995 SRR800049 sphere stage control treatment 4.5117199999999995 SRR801555 embryo RPS19 morpholino 4.51115 SRR726541 5 dpf infection with Mycobacterium marinum 4.50703 SRR535850 larvae hoxb1b mut 4.45826 SRR1005530 embryo RPL11 morpholino 4.4478800000000005 SRR527833 5 dpf normal 4.34944 SRR1647680 head kidney SVCV treatment 4.16849 SRR1647679 head kidney normal 4.1448599999999995 SRR1028004 head normal 4.09906 SRR941753 posterior pectoral fin normal 4.07094 SRR1035984 13 hpf normal 3.9928800000000004 SRR800045 muscle normal 3.80325 SRR1028002 head normal 3.6860800000000005 SRR1534349 larvae DMSO vehicle 3.6708199999999995 SRR891511 brain normal 3.64625 SRR800037 egg normal 3.5889 SRR1028003 head normal 3.5541699999999996 SRR1534350 larvae 5 ug/l BDE47 treatment 3.50065 SRR1004789 larvae impdh2 morpholino 3.44296 SRR527834 head normal 3.4405699999999997 SRR1562529 intestine and pancreas normal 3.43532 SRR610741 3 dpf express Ras 3.4015400000000002 SRR1647681 head kidney SVCV treatment 3.1926 SRR800046 sphere stage 5azaCyD treatment 2.95011 SRR1534351 larvae 500 ug/l BDE47 treatment 2.82825 SRR1035239 liver transgenic mCherry control 2.7985900000000004 SRR891512 blood normal 2.70407 SRR891510 muscle normal 2.67485 SRR1035237 liver transgenic UHRF1 2.66207 SRR748491 germ ring normal 2.63763 SRR1562530 liver normal 2.45729 SRR1039571 gastrointestinal diet 0.1 NPM 2.2339599999999997 SRR891504 liver normal 1.94485 SRR1039573 gastrointestinal diet 0.75 NPM 1.7255599999999998 SRR957180 heart 7 days after heart tip amputation 0.0105454 SRR1648854 brain normal 0.00680558 SRR372800 2 dpf normal 0.00418422 SRR1049814 256 cell normal 0.00249984