sample tissue condition fpkm SRR514028 retina control morpholino 18.109 SRR514030 retina id2a morpholino 13.6936 SRR594771 endothelium normal 11.8444 ERR023144 brain normal 10.7787 SRR1205154 5dpf transgenic sqET20 9.85011 SRR776507 embryo normal 9.10511 SRR658541 6 somite normal 9.10417 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 9.09977 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.09613 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 9.073319999999999 SRR658547 6 somite Gata5/6 morphant 9.01242 SRR776509 embryo Salmonella infected 8.80108 SRR630464 5 dpf injected epidermidis 8.52849 SRR658543 6 somite Gata5 morphan 8.505989999999999 SRR630463 5 dpf normal 8.46486 SRR658533 bud normal 8.46022 SRR658535 bud Gata5 morphant 8.347710000000001 SRR658545 6 somite Gata6 morphant 8.28204 SRR776510 embryo Salmonella infected and miR-146 knockdown 8.18535 SRR1569495 embryo normal 8.167060000000001 SRR797917 embryo pbx2/4-MO and prdm1-/- 8.1511 SRR797911 embryo prdm1-/- 8.09399 SRR797914 embryo pbx2/4-MO 8.08923 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 7.795780000000001 SRR658539 bud Gata5/6 morphant 7.50323 SRR527840 24hpf normal 7.30225 SRR797908 embryo normal 7.27089 SRR527836 24hpf normal 7.265110000000001 SRR776508 embryo miR-146 knockdown 7.25845 SRR1708345 embryo SIBAS 7.1950199999999995 SRR1205160 5dpf transgenic sqET20 and GFP+ 7.178489999999999 ERR594417 retina normal 6.6261399999999995 SRR1291417 5 dpi injected marinum 6.60313 SRR1167752 embryo normal 6.46392 SRR535913 larvae krox mut 6.350969999999999 ERR594416 retina transgenic flk1 6.34514 SRR1291414 5 dpi normal 6.29852 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 6.24177 SRR1562528 eye normal 6.24085 SRR658537 bud Gata6 morphant 6.15365 SRR535890 larvae normal 6.13553 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 6.12655 SRR535943 larvae vangl mut 6.02075 SRR535978 larvae normal 5.926159999999999 SRR1569491 embryo normal 5.8989400000000005 SRR1299127 caudal fin Two days time after treatment 5.80891 SRR942769 embryo myd88+/+ 5.71152 SRR535986 larvae nhsl1b mut 5.69925 SRR1299126 caudal fin One day time after treatment 5.64888 SRR1104058 heart normal 5.6223 SRR1342218 embryo marco morpholino 5.61475 SRR1299128 caudal fin Three days time after treatment 5.6085 SRR516123 skin male and 3.5 year 5.605659999999999 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 5.53425 SRR1167753 embryo bacterial infection 5.5192 SRR535926 larvae normal 5.4877400000000005 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 5.45779 SRR1708343 embryo MUTAS 5.43686 SRR1188152 embryo Insulin 0.5 hpi 5.3550699999999996 SRR1167756 embryo mpeg1 morpholino 5.31237 SRR038624 embryo traf6 morpholino and bacterial infection 5.2862 SRR516128 skin male and 5 month 5.28581 SRR1342216 embryo norml 5.27936 SRR1035978 13 hpf rx3-/- 5.23111 SRR942764 embryo myd88-/- 5.21999 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.15984 SRR749514 24 hpf normal 5.1358 SRR1523214 embryo glut12 morpholino 5.11364 SRR1523211 embryo control morpholino 5.10918 SRR749515 24 hpf eif3ha morphant 5.02877 SRR1342217 embryo infection with Mycobacterium marinum 5.00786 SRR1167757 embryo mpeg1 morpholino and bacterial infection 4.95589 SRR1104059 heart kctd10 mut 4.9549199999999995 SRR1167762 embryo ptpn6 morpholino 4.8572 ERR594418 retina transgenic flk1 and develop tumors 4.83778 SRR1188148 embryo Control PBS 0.5 hpi 4.79146 SRR516121 skin male and 3.5 year 4.76423 SRR516134 skin male and 5 month 4.7606 SRR527832 16-36 hpf normal 4.712680000000001 SRR1004788 larvae impdh1b morpholino 4.69805 SRR527833 5 dpf normal 4.6660699999999995 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 4.64999 ERR023143 swim bladder normal 4.6359699999999995 SRR516129 skin male and 5 month 4.59433 SRR1188156 embryo Control PBS 4 hpi 4.585369999999999 SRR527844 24hpf normal 4.55539 SRR516126 skin male and 5 month 4.5048 SRR831692 embryo normal 4.49651 SRR516122 skin male and 3.5 year 4.47243 SRR592700 pineal gland normal 4.4619 SRR519717 2 dpf FETOH treatment 4.42173 SRR038627 embryo control morpholino 4.3676699999999995 SRR1188160 embryo Insulin 4 hpi 4.34647 SRR519737 2 dpf VD3 treatment 4.32344 SRR038625 embryo traf6 morpholino 4.28345 SRR065196 3 dpf normal 4.27571 SRR592699 pineal gland normal 4.22724 SRR1299129 caudal fin Seven days time after treatment 4.20573 SRR038626 embryo control morpholino and bacterial infection 4.2026 SRR1299125 caudal fin Half day time after treatment 4.19841 SRR594769 blood normal 4.19471 SRR516124 skin male and 3.5 year 4.18825 SRR700537 heart Gata4 morpholino 4.17068 SRR1562533 testis normal 4.1448599999999995 SRR516127 skin male and 5 month 4.10245 SRR941749 anterior pectoral fin normal 4.02831 SRR516133 skin male and 5 month 4.00951 SRR535848 larvae hoxb1b mut 4.00704 SRR1562529 intestine and pancreas normal 4.00392 SRR726540 5 dpf normal 3.99411 SRR1708346 embryo SIBPS 3.9859400000000003 SRR535847 larvae normal 3.9803300000000004 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 3.9802699999999995 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.9759900000000004 SRR1028004 head normal 3.95496 SRR1647682 spleen normal 3.9471800000000004 SRR535850 larvae hoxb1b mut 3.8615699999999995 SRR592698 pineal gland normal 3.85429 SRR065197 3 dpf U1C knockout 3.82475 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.82173 SRR535849 larvae normal 3.7677699999999996 SRR516125 skin male and 3.5 year 3.75506 SRR1004786 larvae control morpholino 3.66729 SRR535851 larvae normal 3.66681 SRR592702 pineal gland normal 3.65475 SRR592701 pineal gland normal 3.57629 SRR592703 pineal gland normal 3.5662300000000005 SRR1299124 caudal fin Zero day time after treatment 3.5075300000000005 SRR1562532 spleen normal 3.48845 SRR1647683 spleen SVCV treatment 3.4764699999999995 SRR1028002 head normal 3.4641 SRR610742 3 dpf express NICD 3.45917 SRR535852 larvae hoxb1b mut 3.40274 SRR700534 heart control morpholino 3.3656900000000003 SRR1647684 spleen SVCV treatment 3.3542300000000003 SRR1048061 pineal gland dark 3.34588 SRR516131 skin male and 5 month 3.33503 SRR1647679 head kidney normal 3.30855 SRR1048059 pineal gland light 3.2808699999999997 SRR633550 larvae exposed to hypoxia stress 3.2766 SRR527834 head normal 3.1971700000000003 SRR941753 posterior pectoral fin normal 3.19418 SRR1647680 head kidney SVCV treatment 3.15633 SRR519747 6 dpf VD3 treatment 3.15191 ERR023146 head kidney normal 3.14111 SRR633544 larvae exposed to cold stress 3.13145 SRR726542 5 dpf infection with control 3.13057 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 3.06663 SRR633516 larvae normal 3.04124 SRR748491 germ ring normal 3.02168 SRR610740 3 dpf normal 3.01306 SRR726541 5 dpf infection with Mycobacterium marinum 3.01178 SRR519727 6 dpf FETOH treatment 2.98889 SRR1708344 embryo MUTPS 2.93418 SRR519722 4 dpf FETOH treatment 2.91882 SRR1562530 liver normal 2.90385 SRR1004785 larvae normal 2.9011099999999996 SRR1028003 head normal 2.89661 SRR1647681 head kidney SVCV treatment 2.87602 SRR610741 3 dpf express Ras 2.86983 SRR1565811 brain normal 2.8432 SRR1021215 sphere stage Mzeomesa 2.8246599999999997 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.82029 SRR1565819 brain normal 2.80603 SRR516130 skin male and 5 month 2.7997400000000003 SRR519732 7 dpf FETOH treatment 2.7523 ERR023145 heart normal 2.7385900000000003 SRR1035984 13 hpf normal 2.73074 SRR1565817 brain normal 2.71658 SRR1565805 brain normal 2.70559 SRR1562531 muscle normal 2.67965 SRR1565809 brain normal 2.66886 SRR519742 4 dpf VD3 treatment 2.66079 SRR519752 7 dpf VD3 treatment 2.5810299999999997 SRR1565807 brain normal 2.56679 SRR1565815 brain normal 2.54121 SRR1534349 larvae DMSO vehicle 2.5186 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.42446 SRR1565813 brain normal 2.4062200000000002 SRR891511 brain normal 2.35907 SRR516135 skin male and 5 month 2.3482 SRR516132 skin male and 5 month 2.24539 SRR1534350 larvae 5 ug/l BDE47 treatment 2.21929 SRR1004787 larvae impdh1a morpholino 2.2189900000000002 SRR886456 256 cell 4-thio-UTP metabolic labeling 2.14059 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.1071 SRR886455 128 cell 4-thio-UTP metabolic labeling 2.08806 SRR1035239 liver transgenic mCherry control 1.90842 SRR1005529 embryo control morpholino 1.7850700000000002 SRR801554 embryo control morpholino 1.7823799999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 1.76105 SRR1004789 larvae impdh2 morpholino 1.75678 SRR891495 heart normal 1.69606 SRR1039571 gastrointestinal diet 0.1 NPM 1.61408 SRR1035237 liver transgenic UHRF1 1.5260799999999999 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 1.46259 SRR801556 embryo RPS19 and p53 morpholino 1.44212 SRR801555 embryo RPS19 morpholino 1.29646 SRR800046 sphere stage 5azaCyD treatment 1.19174 SRR1039573 gastrointestinal diet 0.75 NPM 1.10408 SRR748488 sperm normal 1.0630700000000002 SRR1021213 sphere stage normal 0.98562 SRR527835 tail normal 0.8642270000000001 SRR891512 blood normal 0.849622 SRR1005530 embryo RPL11 morpholino 0.767386 SRR800045 muscle normal 0.660022 SRR748489 egg normal 0.638626 SRR891510 muscle normal 0.571839 SRR891504 liver normal 0.5624279999999999 SRR800049 sphere stage control treatment 0.342416 SRR800043 sphere stage normal 0.303102 SRR800037 egg normal 0.164433 SRR957181 heart normal 0.13163699999999998 SRR957180 heart 7 days after heart tip amputation 0.105972 SRR748490 1 kcell normal 0.105387 SRR1648854 brain normal 0.067898 SRR372800 2 dpf normal 0.048131 SRR1648856 brain normal 0.0450961 SRR372798 28 hpf normal 0.0310482 SRR372802 5 dpf normal 0.0253822 SRR372796 bud normal 0.013808500000000001 SRR1648855 brain normal 0.012189 SRR372791 dome normal 0.0105147 SRR372787 2-4 cell normal 0.00148453