sample tissue condition fpkm SRR594771 endothelium normal 31.8351 SRR1562530 liver normal 23.42 SRR891504 liver normal 22.2584 SRR1569495 embryo normal 19.9382 SRR1205160 5dpf transgenic sqET20 and GFP+ 17.2999 SRR065197 3 dpf U1C knockout 15.0593 ERR594416 retina transgenic flk1 14.7407 ERR594417 retina normal 13.7091 SRR038626 embryo control morpholino and bacterial infection 13.5907 SRR726541 5 dpf infection with Mycobacterium marinum 13.5654 SRR519737 2 dpf VD3 treatment 13.2682 SRR1534349 larvae DMSO vehicle 13.2053 SRR519717 2 dpf FETOH treatment 13.0754 SRR1534350 larvae 5 ug/l BDE47 treatment 12.9115 SRR519727 6 dpf FETOH treatment 12.687999999999999 SRR519752 7 dpf VD3 treatment 12.5778 SRR519732 7 dpf FETOH treatment 12.3393 SRR065196 3 dpf normal 12.3307 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 12.2475 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 12.21 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 12.0771 SRR038624 embryo traf6 morpholino and bacterial infection 11.9616 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 11.9047 SRR535890 larvae normal 11.8387 SRR633516 larvae normal 11.8132 SRR633550 larvae exposed to hypoxia stress 11.7527 SRR519747 6 dpf VD3 treatment 11.6572 SRR1534351 larvae 500 ug/l BDE47 treatment 11.5622 SRR726542 5 dpf infection with control 11.3289 SRR726540 5 dpf normal 11.265999999999998 SRR535851 larvae normal 11.2093 SRR519722 4 dpf FETOH treatment 11.1939 SRR1565809 brain normal 10.9899 SRR1205154 5dpf transgenic sqET20 10.9279 SRR831692 embryo normal 10.7881 SRR1565819 brain normal 10.7551 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 10.6714 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 10.6645 SRR610741 3 dpf express Ras 10.5299 SRR1562528 eye normal 10.4993 SRR1028004 head normal 10.4713 SRR1028002 head normal 10.3411 SRR535849 larvae normal 10.2965 SRR519742 4 dpf VD3 treatment 10.2925 SRR1565811 brain normal 10.2199 SRR1028003 head normal 10.1383 SRR1565815 brain normal 10.0627 SRR535943 larvae vangl mut 10.0191 SRR1565817 brain normal 9.97762 SRR1565805 brain normal 9.96604 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 9.919789999999999 SRR1708343 embryo MUTAS 9.883389999999999 SRR610742 3 dpf express NICD 9.77421 SRR038625 embryo traf6 morpholino 9.75544 SRR630464 5 dpf injected epidermidis 9.734539999999999 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 9.70907 SRR038627 embryo control morpholino 9.60285 SRR1167753 embryo bacterial infection 9.57245 SRR535926 larvae normal 9.56274 SRR749514 24 hpf normal 9.52437 SRR535852 larvae hoxb1b mut 9.44472 SRR1167763 embryo ptpn6 morpholino and bacterial infection 9.35957 SRR535913 larvae krox mut 9.35235 SRR1565807 brain normal 9.34835 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 9.303560000000001 SRR891511 brain normal 9.09801 SRR535850 larvae hoxb1b mut 9.06516 SRR535848 larvae hoxb1b mut 9.04951 SRR535847 larvae normal 9.0478 SRR1167752 embryo normal 8.96696 SRR630463 5 dpf normal 8.75088 SRR1167757 embryo mpeg1 morpholino and bacterial infection 8.63722 SRR941753 posterior pectoral fin normal 8.50561 SRR1565813 brain normal 8.49137 SRR527834 head normal 8.30972 SRR1523214 embryo glut12 morpholino 8.24976 SRR797908 embryo normal 8.24113 SRR610740 3 dpf normal 8.20454 SRR527833 5 dpf normal 8.17562 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 8.16517 SRR1104058 heart normal 8.01113 ERR594418 retina transgenic flk1 and develop tumors 7.99905 SRR776509 embryo Salmonella infected 7.85502 SRR1708345 embryo SIBAS 7.74142 SRR797911 embryo prdm1-/- 7.7225600000000005 SRR1167756 embryo mpeg1 morpholino 7.64082 SRR1188160 embryo Insulin 4 hpi 7.63748 SRR1562532 spleen normal 7.611160000000001 SRR633544 larvae exposed to cold stress 7.60505 SRR1648854 brain normal 7.58165 SRR1291417 5 dpi injected marinum 7.57198 SRR749515 24 hpf eif3ha morphant 7.27078 SRR797917 embryo pbx2/4-MO and prdm1-/- 7.235 SRR1342216 embryo norml 7.2263399999999995 SRR1104059 heart kctd10 mut 7.2211 SRR1188156 embryo Control PBS 4 hpi 7.212739999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 7.20043 SRR941749 anterior pectoral fin normal 7.18692 SRR942769 embryo myd88+/+ 7.16127 SRR797914 embryo pbx2/4-MO 7.1066899999999995 SRR700537 heart Gata4 morpholino 6.884119999999999 SRR658541 6 somite normal 6.838769999999999 SRR942764 embryo myd88-/- 6.71143 SRR700534 heart control morpholino 6.6385 SRR1035978 13 hpf rx3-/- 6.631189999999999 SRR1035981 13 hpf rx3+/+ or rx3+/- 6.5803899999999995 SRR1342217 embryo infection with Mycobacterium marinum 6.513380000000001 SRR527832 16-36 hpf normal 6.43136 SRR1708344 embryo MUTPS 6.39585 SRR1342218 embryo marco morpholino 6.3596 SRR1035239 liver transgenic mCherry control 6.24889 SRR1004788 larvae impdh1b morpholino 6.21218 SRR1562533 testis normal 6.1254599999999995 SRR1167762 embryo ptpn6 morpholino 6.09315 SRR592700 pineal gland normal 6.07417 SRR1188148 embryo Control PBS 0.5 hpi 6.03062 SRR1004787 larvae impdh1a morpholino 6.010669999999999 SRR1569491 embryo normal 5.99148 SRR658545 6 somite Gata6 morphant 5.97505 SRR1048061 pineal gland dark 5.97051 SRR658547 6 somite Gata5/6 morphant 5.86345 SRR1004789 larvae impdh2 morpholino 5.77376 SRR1188152 embryo Insulin 0.5 hpi 5.71975 SRR592703 pineal gland normal 5.70857 SRR1021213 sphere stage normal 5.67168 SRR1021215 sphere stage Mzeomesa 5.67075 SRR514028 retina control morpholino 5.62106 SRR1708346 embryo SIBPS 5.61943 SRR1291414 5 dpi normal 5.5337 ERR023144 brain normal 5.51234 SRR776510 embryo Salmonella infected and miR-146 knockdown 5.475280000000001 SRR658543 6 somite Gata5 morphan 5.3739099999999995 SRR1004786 larvae control morpholino 5.36592 SRR1647680 head kidney SVCV treatment 5.305680000000001 SRR514030 retina id2a morpholino 5.15079 SRR776508 embryo miR-146 knockdown 5.068219999999999 SRR658535 bud Gata5 morphant 5.0569999999999995 SRR1648855 brain normal 4.9842699999999995 SRR658537 bud Gata6 morphant 4.9382 SRR891510 muscle normal 4.882630000000001 SRR594769 blood normal 4.87943 SRR1647679 head kidney normal 4.7876199999999995 SRR592702 pineal gland normal 4.75874 SRR592701 pineal gland normal 4.67491 SRR1562529 intestine and pancreas normal 4.61686 SRR776507 embryo normal 4.60576 SRR1004785 larvae normal 4.5799199999999995 SRR535986 larvae nhsl1b mut 4.48564 SRR1035984 13 hpf normal 4.47201 SRR592698 pineal gland normal 4.47161 SRR1048059 pineal gland light 4.39307 SRR1523211 embryo control morpholino 4.30788 SRR658539 bud Gata5/6 morphant 4.267119999999999 SRR658533 bud normal 4.14939 SRR372800 2 dpf normal 4.12531 SRR800043 sphere stage normal 4.06847 SRR592699 pineal gland normal 4.0507800000000005 SRR372798 28 hpf normal 4.00571 SRR372789 1K cell normal 3.97298 SRR527844 24hpf normal 3.9597 SRR516126 skin male and 5 month 3.92726 SRR1647681 head kidney SVCV treatment 3.8597699999999997 SRR516127 skin male and 5 month 3.8179800000000004 SRR800049 sphere stage control treatment 3.73282 SRR1299124 caudal fin Zero day time after treatment 3.73011 SRR1562531 muscle normal 3.68796 SRR1299128 caudal fin Three days time after treatment 3.6389199999999997 SRR527840 24hpf normal 3.6185 SRR800045 muscle normal 3.59796 SRR527836 24hpf normal 3.5352099999999997 SRR1647682 spleen normal 3.52315 SRR1647683 spleen SVCV treatment 3.46967 SRR372802 5 dpf normal 3.36827 SRR516135 skin male and 5 month 3.3001199999999997 SRR516128 skin male and 5 month 3.18507 SRR1039571 gastrointestinal diet 0.1 NPM 3.14325 SRR516130 skin male and 5 month 3.05764 SRR801556 embryo RPS19 and p53 morpholino 2.9431599999999998 SRR527835 tail normal 2.8710299999999997 SRR1647684 spleen SVCV treatment 2.81871 SRR516129 skin male and 5 month 2.7437 ERR023146 head kidney normal 2.70706 SRR1299129 caudal fin Seven days time after treatment 2.59112 SRR516132 skin male and 5 month 2.58878 SRR516125 skin male and 3.5 year 2.57322 SRR516124 skin male and 3.5 year 2.5457400000000003 SRR1299126 caudal fin One day time after treatment 2.4599599999999997 SRR1035237 liver transgenic UHRF1 2.43825 SRR1299127 caudal fin Two days time after treatment 2.39648 SRR1049814 256 cell normal 2.38788 SRR1005529 embryo control morpholino 2.3538900000000003 SRR801554 embryo control morpholino 2.35035 SRR748490 1 kcell normal 2.33708 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.29961 SRR800046 sphere stage 5azaCyD treatment 2.18759 SRR516131 skin male and 5 month 2.18476 ERR023145 heart normal 2.18115 SRR516134 skin male and 5 month 2.1535599999999997 SRR891495 heart normal 2.1261200000000002 SRR516123 skin male and 3.5 year 2.09158 SRR372791 dome normal 2.05228 ERR023143 swim bladder normal 2.00806 SRR535978 larvae normal 1.9648400000000001 SRR957180 heart 7 days after heart tip amputation 1.9183700000000001 SRR1039573 gastrointestinal diet 0.75 NPM 1.9092 SRR800037 egg normal 1.90755 SRR372796 bud normal 1.9063700000000001 SRR801555 embryo RPS19 morpholino 1.88152 SRR1621206 embryo normal 1.7906799999999998 SRR1005530 embryo RPL11 morpholino 1.7606700000000002 SRR891512 blood normal 1.75141 SRR957181 heart normal 1.62591 SRR748491 germ ring normal 1.5305 SRR516122 skin male and 3.5 year 1.5262799999999999 SRR1299125 caudal fin Half day time after treatment 1.4848299999999999 SRR748488 sperm normal 1.40755 SRR516121 skin male and 3.5 year 1.38483 SRR516133 skin male and 5 month 1.2081600000000001 SRR372787 2-4 cell normal 1.15015 SRR886455 128 cell 4-thio-UTP metabolic labeling 1.05431 SRR886456 256 cell 4-thio-UTP metabolic labeling 1.01705 SRR372793 shield normal 0.8353959999999999 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.816915 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.7446119999999999 SRR1648856 brain normal 0.7239720000000001 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.647463 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.621391 SRR748489 egg normal 0.35894000000000004