sample tissue condition fpkm SRR1648856 brain normal 89.0067 SRR1569491 embryo normal 76.6659 SRR1035237 liver transgenic UHRF1 66.6853 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 65.5468 SRR535978 larvae normal 50.8438 SRR1299126 caudal fin One day time after treatment 49.9068 SRR1299125 caudal fin Half day time after treatment 44.3663 SRR700537 heart Gata4 morpholino 36.7374 SRR372796 bud normal 36.2621 SRR1299127 caudal fin Two days time after treatment 36.125 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 35.8739 SRR535986 larvae nhsl1b mut 35.6143 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 35.2126 SRR1299128 caudal fin Three days time after treatment 34.0931 SRR1291417 5 dpi injected marinum 33.8466 SRR516125 skin male and 3.5 year 33.6326 SRR527840 24hpf normal 33.5093 SRR1299124 caudal fin Zero day time after treatment 32.8557 SRR1299129 caudal fin Seven days time after treatment 32.5757 SRR1035239 liver transgenic mCherry control 31.3372 SRR527836 24hpf normal 30.4564 SRR700534 heart control morpholino 30.252 SRR1647684 spleen SVCV treatment 30.1142 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 30.109 SRR1647683 spleen SVCV treatment 29.9728 SRR1648854 brain normal 29.8784 SRR516132 skin male and 5 month 29.7684 SRR1291414 5 dpi normal 28.5057 SRR516124 skin male and 3.5 year 28.299 SRR776508 embryo miR-146 knockdown 27.8526 SRR776507 embryo normal 27.7294 SRR1647680 head kidney SVCV treatment 27.3701 SRR516131 skin male and 5 month 26.9292 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 26.0603 SRR797914 embryo pbx2/4-MO 25.8596 SRR1523211 embryo control morpholino 25.7683 SRR1647682 spleen normal 25.6526 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 25.6178 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 25.336 SRR797908 embryo normal 24.6587 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 24.4929 SRR797917 embryo pbx2/4-MO and prdm1-/- 24.3197 SRR516135 skin male and 5 month 24.2131 SRR1004787 larvae impdh1a morpholino 23.4355 SRR797911 embryo prdm1-/- 23.3201 SRR1021213 sphere stage normal 23.0713 SRR516128 skin male and 5 month 22.476999999999997 SRR1004785 larvae normal 21.5546 SRR1205160 5dpf transgenic sqET20 and GFP+ 21.3549 SRR658533 bud normal 21.0967 SRR630464 5 dpf injected epidermidis 20.8013 SRR776510 embryo Salmonella infected and miR-146 knockdown 20.6267 SRR516130 skin male and 5 month 20.3927 SRR658539 bud Gata5/6 morphant 20.0755 SRR1004786 larvae control morpholino 20.0187 SRR1004788 larvae impdh1b morpholino 19.9222 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 19.8869 SRR891512 blood normal 19.8535 SRR658545 6 somite Gata6 morphant 19.5697 SRR516126 skin male and 5 month 19.2414 SRR658547 6 somite Gata5/6 morphant 19.22 SRR038625 embryo traf6 morpholino 19.2168 SRR630463 5 dpf normal 18.7181 SRR527844 24hpf normal 18.6632 SRR516133 skin male and 5 month 18.3886 SRR372800 2 dpf normal 18.386 SRR1647681 head kidney SVCV treatment 18.0701 SRR891495 heart normal 17.4387 SRR372798 28 hpf normal 17.3126 SRR065196 3 dpf normal 17.2957 SRR748489 egg normal 17.0443 SRR527832 16-36 hpf normal 16.991 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 16.8095 SRR658541 6 somite normal 16.8004 SRR658535 bud Gata5 morphant 16.778 SRR1167757 embryo mpeg1 morpholino and bacterial infection 16.7241 SRR891510 muscle normal 16.6677 SRR942769 embryo myd88+/+ 16.5392 SRR516121 skin male and 3.5 year 16.2855 SRR516127 skin male and 5 month 16.2504 SRR038624 embryo traf6 morpholino and bacterial infection 16.1752 SRR1167763 embryo ptpn6 morpholino and bacterial infection 16.1628 SRR1104058 heart normal 15.9857 SRR516134 skin male and 5 month 15.8067 SRR1648855 brain normal 15.772 SRR1004789 larvae impdh2 morpholino 15.7648 SRR658537 bud Gata6 morphant 15.5217 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 15.4486 SRR038627 embryo control morpholino 14.8936 SRR1647679 head kidney normal 14.8652 SRR1205154 5dpf transgenic sqET20 14.8476 SRR886456 256 cell 4-thio-UTP metabolic labeling 14.7851 SRR516129 skin male and 5 month 14.5608 SRR1167762 embryo ptpn6 morpholino 14.4002 SRR1342216 embryo norml 14.1298 SRR1188148 embryo Control PBS 0.5 hpi 14.0942 SRR065197 3 dpf U1C knockout 14.0468 SRR1167753 embryo bacterial infection 14.0043 SRR1167752 embryo normal 13.9775 SRR776509 embryo Salmonella infected 13.927 SRR886457 512 cell 4-thio-UTP metabolic labeling 13.7883 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 13.7629 SRR1342217 embryo infection with Mycobacterium marinum 13.5426 SRR372793 shield normal 13.2673 SRR1188160 embryo Insulin 4 hpi 13.1877 SRR1562533 testis normal 13.1445 SRR516123 skin male and 3.5 year 13.1409 SRR1569495 embryo normal 13.0876 SRR658543 6 somite Gata5 morphan 13.0396 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 12.9341 SRR038626 embryo control morpholino and bacterial infection 12.8235 SRR1188152 embryo Insulin 0.5 hpi 12.4943 SRR594771 endothelium normal 12.298 SRR1104059 heart kctd10 mut 12.2428 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 12.1688 SRR1562529 intestine and pancreas normal 11.8929 SRR957181 heart normal 11.7582 SRR1523214 embryo glut12 morpholino 11.6857 SRR1021215 sphere stage Mzeomesa 11.5523 SRR594769 blood normal 11.4412 SRR748491 germ ring normal 11.1426 SRR1039571 gastrointestinal diet 0.1 NPM 10.6329 SRR372791 dome normal 10.5508 SRR1039573 gastrointestinal diet 0.75 NPM 10.4186 SRR942764 embryo myd88-/- 10.2693 SRR516122 skin male and 3.5 year 10.2643 SRR726542 5 dpf infection with control 10.1787 SRR592700 pineal gland normal 10.1251 SRR891511 brain normal 10.0259 SRR1188156 embryo Control PBS 4 hpi 9.79905 SRR1562532 spleen normal 9.72362 SRR1005529 embryo control morpholino 9.63617 SRR801554 embryo control morpholino 9.62168 SRR749514 24 hpf normal 9.4259 SRR1167756 embryo mpeg1 morpholino 9.40254 SRR941753 posterior pectoral fin normal 9.3592 SRR1565813 brain normal 8.77995 SRR891504 liver normal 8.71272 SRR941749 anterior pectoral fin normal 8.70702 SRR372802 5 dpf normal 8.570139999999999 SRR527833 5 dpf normal 8.510760000000001 SRR748488 sperm normal 8.37396 SRR519752 7 dpf VD3 treatment 8.3541 SRR1562528 eye normal 8.30043 SRR1342218 embryo marco morpholino 8.19073 SRR1708346 embryo SIBPS 7.997330000000001 SRR749515 24 hpf eif3ha morphant 7.98721 SRR519747 6 dpf VD3 treatment 7.8898399999999995 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 7.854 SRR957180 heart 7 days after heart tip amputation 7.68854 SRR1708345 embryo SIBAS 7.594060000000001 SRR519737 2 dpf VD3 treatment 7.42887 SRR1565811 brain normal 7.35645 SRR610741 3 dpf express Ras 7.246460000000001 SRR527834 head normal 7.2412600000000005 SRR1565805 brain normal 7.078939999999999 SRR519717 2 dpf FETOH treatment 7.008380000000001 SRR519742 4 dpf VD3 treatment 6.928489999999999 SRR1562531 muscle normal 6.90535 SRR1565817 brain normal 6.823510000000001 SRR535852 larvae hoxb1b mut 6.80762 SRR726541 5 dpf infection with Mycobacterium marinum 6.706230000000001 SRR519727 6 dpf FETOH treatment 6.61994 SRR519732 7 dpf FETOH treatment 6.613980000000001 SRR1565809 brain normal 6.5892100000000005 SRR535913 larvae krox mut 6.564019999999999 SRR1035978 13 hpf rx3-/- 6.52426 SRR1565815 brain normal 6.45918 SRR535849 larvae normal 6.231240000000001 SRR1565819 brain normal 6.102119999999999 SRR831692 embryo normal 6.0658 SRR1035984 13 hpf normal 5.9913300000000005 SRR535851 larvae normal 5.90722 SRR535848 larvae hoxb1b mut 5.603680000000001 SRR610742 3 dpf express NICD 5.51915 SRR519722 4 dpf FETOH treatment 5.51705 SRR535943 larvae vangl mut 5.43088 SRR1534350 larvae 5 ug/l BDE47 treatment 5.13938 SRR801556 embryo RPS19 and p53 morpholino 5.0680000000000005 SRR1534351 larvae 500 ug/l BDE47 treatment 4.90217 SRR1028002 head normal 4.87925 SRR1565807 brain normal 4.84393 SRR1048059 pineal gland light 4.83244 SRR535847 larvae normal 4.80334 ERR594417 retina normal 4.57624 ERR594416 retina transgenic flk1 4.55007 SRR1005530 embryo RPL11 morpholino 4.22736 SRR535926 larvae normal 4.135619999999999 SRR801555 embryo RPS19 morpholino 4.06158 SRR592698 pineal gland normal 3.99335 ERR594418 retina transgenic flk1 and develop tumors 3.9842 SRR1562530 liver normal 3.9819999999999998 SRR535850 larvae hoxb1b mut 3.9053400000000003 SRR1534349 larvae DMSO vehicle 3.9028400000000003 SRR592701 pineal gland normal 3.89279 SRR592703 pineal gland normal 3.79294 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.68174 SRR535890 larvae normal 3.6469099999999997 SRR1048061 pineal gland dark 3.61564 SRR726540 5 dpf normal 3.5975599999999996 SRR1049814 256 cell normal 3.40755 SRR592699 pineal gland normal 3.2728099999999998 SRR633516 larvae normal 3.20428 SRR527835 tail normal 3.1209599999999997 ERR023144 brain normal 3.07002 SRR633550 larvae exposed to hypoxia stress 3.02688 SRR748490 1 kcell normal 2.7741700000000002 SRR1028004 head normal 2.75389 SRR372787 2-4 cell normal 2.6873299999999998 SRR1028003 head normal 2.63079 SRR592702 pineal gland normal 2.4898 SRR1708344 embryo MUTPS 2.4357 SRR1621206 embryo normal 2.3903 SRR372789 1K cell normal 2.20681 SRR514028 retina control morpholino 2.16666 SRR610740 3 dpf normal 2.0885 SRR633544 larvae exposed to cold stress 2.0512200000000003 SRR886455 128 cell 4-thio-UTP metabolic labeling 1.7564799999999998 SRR514030 retina id2a morpholino 1.61453 SRR1708343 embryo MUTAS 1.53997 ERR023146 head kidney normal 1.20995 ERR023145 heart normal 1.0761 SRR800043 sphere stage normal 0.606694 SRR800046 sphere stage 5azaCyD treatment 0.40424899999999997 SRR800049 sphere stage control treatment 0.272056 ERR023143 swim bladder normal 0.221633